MIGS Cultured Bacterial/Archaeal sample from Lacto... - BioSample

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Result Filters

Identifiers: BioSample: SAMN00001470; Sample name: BCM-HMP0048; SRA: SRS001935

Organism: Lacticaseibacillus paracasei subsp. paracasei ATCC 25302 = DSM 5622 = JCM 8130
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lacticaseibacillus; Lacticaseibacillus paracasei; Lacticaseibacillus paracasei subsp. paracasei

Attributes

strain	ATCC 25302
estimated size	2886000
culture collection	ATCC:25302
local-scale environmental context	Homo sapiens-associated habitat [ENVO:00009003]
investigation type	missing
host taxonomy ID	9606 (9606)
sub species	paracasei
environmental medium	biological product [ENVO:02000043]
number of replicons	not determined
reference for biomaterial	not determined
geographic location	not determined
broad-scale environmental context	terrestrial biome [ENVO:00000446]
latitude and longitude	not determined
environmental package	missing
collection date	not determined
host	Homo sapiens
isolation and growth condition	not determined
source material identifiers	ATCC 25302, NCDO 151, R094
project name	Lactobacillus paracasei ATCC 25302
isolation source	missing
misc_param: HMP supersite	gastrointestinal_tract
project_type	Reference Genome
nucleic acid extraction	not determined
finishing strategy (depth of coverage)	Level 2: High-Quality Draft18.44x;174
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
sequencing method	454-GS-FLX, Illumina, Sanger
assembly	Newbler v. 1.1.03.24
misc_param: HMP body site	not determined
type-material	type strain of Lactobacillus paracasei