MIGS Cultured Bacterial/Archaeal sample from Lacto... - BioSample

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Result Filters

Identifiers: BioSample: SAMN00001473; Sample name: BCM-HMP0055; SRA: SRS001938

Organism: Limosilactobacillus fermentum ATCC 14931
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Limosilactobacillus; Limosilactobacillus fermentum

Attributes

strain	ATCC 14931
estimated size	1797000
culture collection	ATCC:14931
local-scale environmental context	Homo sapiens-associated habitat [ENVO:00009003]
investigation type	missing
host taxonomy ID	9606 (9606)
environmental medium	biological product [ENVO:02000043]
number of replicons	not determined
reference for biomaterial	not determined
geographic location	not determined
broad-scale environmental context	terrestrial biome [ENVO:00000446]
latitude and longitude	not determined
environmental package	missing
collection date	not determined
host	Homo sapiens
isolation and growth condition	not determined
source material identifiers	ATCC 14931, NCIB 11840
project name	Lactobacillus fermentum ATCC 14931
isolation source	missing
misc_param: HMP supersite	gastrointestinal_tract
project_type	Reference Genome
nucleic acid extraction	not determined
finishing strategy (depth of coverage)	Level 3: Improved-High-Quality Draft56.45x;145
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
sequencing method	454-GS-FLX, Illumina, Sanger
assembly	Newbler v. 2.0.0-Eclipse
misc_param: HMP body site	not determined
type-material	type strain of Lactobacillus fermentum