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MIGS Cultured Bacterial/Archaeal sample from Peptoniphilus duerdenii ATCC BAA-1640

Identifiers
BioSample: SAMN00117215; SRA: SRS118748
Organism
Peptoniphilus duerdenii ATCC BAA-1640
cellular organisms; Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus; Peptoniphilus duerdenii
Package
MIGS: cultured bacteria/archaea; version 4.0
Attributes
collection datenot determined
estimated size2082000
isolation and growth conditionnot determined
hostHomo sapiens
latitude and longitudenot determined
environment biometerrestrial biome [ENVO:00000446]
environment featureHomo sapiens-associated habitat [ENVO:00009003]
investigation typemissing
host taxonomy ID9606 (9606)
project namePeptoniphilus duerdenii ATCC BAA-1640
geographic locationnot determined
source material identifiersATCC BAA-1640
environment materialbiological product [ENVO:02000043]
reference for biomaterialnot determined
number of repliconsnot determined
environmental packagemissing
strainATCC BAA-1640
culture collectionATCC:BAA-1640
isolation sourcemissing
finishing strategy (depth of coverage)Level 2: High-Quality Draft36.2x;61
project_typeReference Genome
misc_param: HMP body siteVaginal
nucleic acid extractionnot determined
assemblyNewbler v. 2.3-10192009
misc_param: HMP supersiteurogenital_tract
sophttp://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
sequencing method454-Paired-end
Description

Peptoniphilus duerdenii strain ATCC BAA-1640

Keywords: GSC:MIxS;MIGS:4.0

Links
Human Microbiome Project at Baylor College of Medicine
BioProjects
PRJNA224116
Retrieve all samples from this project

PRJNA50529 Peptoniphilus duerdenii ATCC BAA-1640
Retrieve all samples from this project

Submission
BCM; 2010-11-02
Accession:
SAMN00117215
ID:
117215

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