Display Settings:

Format

Send to:

Choose Destination

MIGS Cultured Bacterial/Archaeal sample from Clostridium difficile NAP07

Identifiers
BioSample: SAMN00001465; Sample name: BCM-HMP0034; SRA: SRS001930
Organism
Peptoclostridium difficile NAP07
cellular organisms; Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium; Peptoclostridium difficile
Package
MIGS: cultured bacteria/archaea; version 4.0
Attributes
collection datenot determined
estimated size3862000
hostHomo sapiens
latitude and longitudenot determined
environment biometerrestrial biome [ENVO:00000446]
source material identifiersBEI HM-88
investigation typebacteria_archaea
host taxonomy ID9606 (9606)
environment featurehuman-associated habitat [ENVO:00009003]
project nameClostridium difficile NAP07
geographic locationnot determined
reference for biomaterialnot determined
environment materialbiological product [ENVO:02000043]
isolation and growth conditionnot determined
environmental packagemissing
strainNAP07
number of repliconsnot determined
isolation sourcemissing
finishing strategy (depth of coverage)Level 2: High-Quality Draft105.7x;100
sophttp://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
project_typeReference Genome
misc_param: HMP body sitenot determined
nucleic acid extractionnot determined
assemblyNewbler v. 2.3-10192009
misc_param: HMP supersitegastrointestinal_tract
sequencing method454
Description

Clostridium difficile NAP07

Keywords: GSC:MIxS;MIGS:4.0

Links
Human Microbiome Project at Baylor College of Medicine
Submission
BCM; 2009-01-08
Accession:
SAMN00001465
ID:
1465

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Write to the Help Desk