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MIGS Cultured Bacterial/Archaeal sample from Prevotella oralis ATCC 33269

Identifiers
BioSample: SAMN00216885; SRA: SRS173671
Organism
Prevotella oralis ATCC 33269
cellular organisms; Bacteria; Bacteroidetes/Chlorobi group; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; Prevotella oralis
Package
MIGS: cultured bacteria/archaea; version 4.0
Attributes
collection datenot determined
estimated size2834000
isolation and growth conditionnot determined
hostHomo sapiens
latitude and longitudenot determined
environment biometerrestrial biome [ENVO:00000446]
environment featureHomo sapiens-associated habitat [ENVO:00009003]
investigation typemissing
host taxonomy ID9606 (9606)
project namePrevotella oralis ATCC 33269
geographic locationnot determined
source material identifiersATCC 33269, VPI D27B-24, NCTC 11459
environment materialbiological product [ENVO:02000043]
reference for biomaterialnot determined
number of repliconsnot determined
environmental packagemissing
strainATCC 33269
finishing strategy (depth of coverage)Level 5: Non-contiguous Finished33.7x;6
project_typeReference Genome
misc_param: HMP body siteVaginal
nucleic acid extractionnot determined
assemblyNewbler v. 2.3-01162009
misc_param: HMP supersiteurogenital_tract
sophttp://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
sequencing method454-Paired-end
Description

Prevotella oralis strain ATCC 33269

Keywords: GSC:MIxS;MIGS:4.0

Links
Human Microbiome Project at Baylor College of Medicine

Submission
BCM; 2011-03-01

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