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MIGS Cultured Bacterial/Archaeal sample from Enterococcus faecium TX1330

Identifiers
BioSample: SAMN00002238; Sample name: BCM-HMP0078; SRA: SRS002521
Organism
Enterococcus faecium TX1330
cellular organisms; Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus; Enterococcus faecium
Package
MIGS: cultured bacteria/archaea; version 4.0
Attributes
strainTX1330
estimated size2721000
environment featureHomo sapiens-associated habitat [ENVO:00009003]
investigation typemissing
host taxonomy ID9606 (9606)
environment materialbiological product [ENVO:02000043]
number of repliconsnot determined
reference for biomaterialnot determined
geographic locationnot determined
environment biometerrestrial biome [ENVO:00000446]
latitude and longitudenot determined
environmental packagemissing
collection datenot determined
hostHomo sapiens
isolation and growth conditionnot determined
source material identifiersBEI HM-204
project nameEnterococcus faecium TX1330
isolation sourcemissing
misc_param: HMP supersitegastrointestinal_tract
project_typeReference Genome
nucleic acid extractionnot determined
finishing strategy (depth of coverage)Level 2: High-Quality Draft74.67x;156
sophttp://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
sequencing method454, Sanger, Illumina
assemblyNewbler v. 1.1.03.24
misc_param: HMP body sitenot determined
Description

Enterococcus faecium TX1330

Keywords: GSC:MIxS;MIGS:4.0

Links
BCM HMP Project
BioProjects
PRJNA224116
Retrieve all samples from this project

PRJNA31463 Enterococcus faecium TX1330
Retrieve all samples from this project

Submission
BCM; 2009-04-17
Accession:
SAMN00002238
ID:
2238

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