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MIGS Cultured Bacterial/Archaeal sample from Lactobacillus reuteri MM4-1A

Identifiers
BioSample: SAMN00001504; Sample name: BCM-HMP0053; SRA: SRS001980
Organism
Lactobacillus reuteri MM4-1A
cellular organisms; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus reuteri
Package
MIGS: cultured bacteria/archaea; version 4.0
Attributes
collection datenot determined
estimated size1935000
isolation and growth conditionnot determined
hostHomo sapiens
latitude and longitudenot determined
environment biometerrestrial biome [ENVO:00000446]
environment featureHomo sapiens-associated habitat [ENVO:00009003]
investigation typemissing
host taxonomy ID9606 (9606)
project nameLactobacillus reuteri MM4-1A
geographic locationnot determined
source material identifiersATCC PTA6475
environment materialbiological product [ENVO:02000043]
reference for biomaterialnot determined
number of repliconsnot determined
environmental packagemissing
strainMM4-1A
culture collectionATCC:PTA6475
isolation sourcegastrointestinal tract
finishing strategy (depth of coverage)Level 5: Non-contiguous Finished103.58x;131
project_typeReference Genome
misc_param: HMP body sitenot determined
nucleic acid extractionnot determined
assemblyNewbler v. 2.3-10192009
misc_param: HMP supersitegastrointestinal_tract
sequencing method454-GS-FLX, Illumina, Sanger
sophttp://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
Description

Lactobacillus reuteri MM4-1

Keywords: GSC:MIxS;MIGS:4.0

Links
BCM HMP Project
BioProjects
PRJNA224116
Retrieve all samples from this project

PRJNA31511 Lactobacillus reuteri MM4-1A
Retrieve all samples from this project

Submission
BCM; 2009-01-16
Accession:
SAMN00001504
ID:
1504

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