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MIGS Cultured Bacterial/Archaeal sample from Lactobacillus antri DSM 16041

Identifiers
BioSample: SAMN00001477; SRA: SRS001942; Sample name: BCM-HMP0080
Organism
Lactobacillus antri DSM 16041
cellular organisms; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus antri
Package
MIGS: cultured bacteria/archaea; version 4.0
Attributes
collection datenot determined
estimated size2242000
isolation and growth conditionnot determined
hostHomo sapiens
latitude and longitudenot determined
environment biometerrestrial biome [ENVO:00000446]
environment featureHomo sapiens-associated habitat [ENVO:00009003]
investigation typemissing
host taxonomy ID9606 (9606)
project nameLactobacillus antri DSM 16041
geographic locationnot determined
source material identifiersDSM 16041, CCUG 48456, LMG 22111
environment materialbiological product [ENVO:02000043]
reference for biomaterialnot determined
number of repliconsnot determined
environmental packagemissing
strainDSM 16041
finishing strategy (depth of coverage)Level 2: High-Quality Draft42.47x;76
project_typeReference Genome
misc_param: HMP body siteStomach
nucleic acid extractionnot determined
assemblyNewbler v. 2.0-01162009
misc_param: HMP supersitegastrointestinal_tract
sequencing method454-GS-FLX, Sanger, Illumina
sophttp://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
Description

Lactobacillus antri DSM 16041

Keywords: GSC:MIxS;MIGS:4.0

Links
BCM HMP Project

Submission
BCM; 2009-01-08

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