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MIGS Cultured Bacterial/Archaeal sample from Lactobacillus acidophilus ATCC 4796

Identifiers
BioSample: SAMN00001471; Sample name: BCM-HMP0051; SRA: SRS001936
Organism
Lactobacillus acidophilus ATCC 4796
cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus acidophilus
Package
MIGS: cultured bacteria/archaea; version 4.0
Attributes
strainATCC 4796
estimated size2000000
culture collectionATCC:4796
environment featureHomo sapiens-associated habitat [ENVO:00009003]
investigation typemissing
host taxonomy ID9606 (9606)
environment materialbiological product [ENVO:02000043]
number of repliconsnot determined
reference for biomaterialnot determined
geographic locationnot determined
environment biometerrestrial biome [ENVO:00000446]
latitude and longitudenot determined
environmental packagemissing
collection datenot determined
hostHomo sapiens
isolation and growth conditionnot determined
source material identifiersATCC 4796
project nameLactobacillus acidophilus ATCC 4796
isolation sourcemissing
misc_param: HMP supersitegastrointestinal_tract
project_typeReference Genome
nucleic acid extractionnot determined
finishing strategy (depth of coverage)Level 2: High-Quality Draft35.34x;69
sophttp://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
sequencing method454-GS-FLX, Illumina, Sanger
assemblyNewbler v. 2.0.0-Eclipse
misc_param: HMP body sitenot determined
Description

Lactobacillus acidophilus ATCC 4796

Keywords: GSC:MIxS;MIGS:4.0

Links
BCM HMP Project
BioProject
PRJNA31477 Lactobacillus acidophilus ATCC 4796
Retrieve all samples from this project

Submission
BCM; 2009-01-08
Accession:
SAMN00001471
ID:
1471

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