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MIGS Cultured Bacterial/Archaeal sample from Staphylococcus capitis SK14

Identifiers
BioSample: SAMN00000713; Sample name: HMP042-454 Sample; SRA: SRS001041
Organism
Staphylococcus capitis SK14
cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus capitis
Package
MIGS: cultured bacteria/archaea; version 4.0
Attributes
collection datenot determined
estimated size2436000
isolation and growth conditionnot determined
hostHomo sapiens
latitude and longitudenot determined
environment biometerrestrial biome [ENVO:00000446]
investigation typemissing
environment featurehuman-associated habitat [ENVO:00009003]
host taxonomy ID9606 (9606)
project nameStaphylococcus capitis SK14
geographic locationnot determined
source material identifiersBEI HM-117
environment materialbiological product [ENVO:02000043]
reference for biomaterialnot determined
number of repliconsnot determined
strainSK14
environmental packagemissing
isolation sourceskin from right arm of human male
finishing strategy (depth of coverage)Level 5: Non-contiguous Finished18x;32
project_typeReference Genome
misc_param: HMP body siteRight arm
nucleic acid extractionnot determined
assemblyNewbler v. 1.1.03.24-64-7
misc_param: HMP supersiteskin
sequencing methodnot determined
sophttp://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
Description

Staphylococcus capitis is a gram-positive bacterium that inhabits the skin. The bacterium has been isolated from the bloodstream of a premature infant that died of sepsis.

Keywords: GSC:MIxS;MIGS:4.0

Links
Human Microbiome Project at J. Craig Venter Institute
BioProject
PRJNA31013 Staphylococcus capitis SK14
Retrieve all samples from this project

Submission
JCVI; 2008-10-03
Accession:
SAMN00000713
ID:
713

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