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MIGS Cultured Bacterial/Archaeal sample from Staphylococcus aureus subsp. aureus USA300_TCH959

Identifiers
BioSample: SAMN00001491; SRA: SRS001956; Sample name: BCM-HMP0023
Organism
Staphylococcus aureus subsp. aureus USA300_TCH959
cellular organisms; Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus; Staphylococcus aureus subsp. aureus USA300
Package
MIGS: cultured bacteria/archaea; version 4.0
Attributes
collection datenot determined
estimated size2741000
hostHomo sapiens
latitude and longitudenot determined
environment biometerrestrial biome [ENVO:00000446]
source material identifiersATCC BAA-1718
investigation typebacteria_archaea
host taxonomy ID9606 (9606)
environment featurehuman-associated habitat [ENVO:00009003]
project nameStaphylococcus aureus aureus USA300_TCH959
geographic locationnot determined
reference for biomaterialnot determined
environment materialbiological product [ENVO:02000043]
isolation and growth conditionnot determined
environmental packagemissing
strainUSA300_TCH959
number of repliconsnot determined
finishing strategy (depth of coverage)Level 2: High-Quality Draft64.23x;256
sophttp://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
project_typeReference Genome
misc_param: HMP body sitenot determined
nucleic acid extractionnot determined
assemblyNewbler v. 2.0.0-Eclipse
misc_param: HMP supersiteskin
sequencing method454, Sanger, Illumina
Description

Staphylococcus aureus TCH959

Keywords: GSC:MIxS;MIGS:4.0

Links
Human Microbiome Project at Baylor College of Medicine

Submission
BCM; 2009-01-09

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