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MIGS Cultured Bacterial/Archaeal sample from Enterococcus faecalis TX1322

Identifiers
BioSample: SAMN00001498; SRA: SRS001972; Sample name: BCM-HMP0086
Organism
Enterococcus faecalis TX1322
cellular organisms; Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus; Enterococcus faecalis
Package
MIGS: cultured bacteria/archaea; version 4.0
Attributes
collection datenot determined
estimated size2930000
isolation and growth conditionnot determined
hostHomo sapiens
latitude and longitudenot determined
environment biometerrestrial biome [ENVO:00000446]
environment featureHomo sapiens-associated habitat [ENVO:00009003]
investigation typemissing
host taxonomy ID9606 (9606)
project nameEnterococcus faecalis TX1322
geographic locationnot determined
source material identifiersBEI HM-202
environment materialbiological product [ENVO:02000043]
reference for biomaterialnot determined
number of repliconsnot determined
environmental packagemissing
strainTX1322
finishing strategy (depth of coverage)Level 3: Improved-High-Quality Draft27.65x;116
project_typeReference Genome
misc_param: HMP body sitenot determined
nucleic acid extractionnot determined
assemblyNewbler v. 1.1.02.15
misc_param: HMP supersitegastrointestinal_tract
sequencing method454-GS-FLX, Illumina, Sanger
sophttp://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
Description

Enterococcus faecalis TX1322

Keywords: GSC:MIxS;MIGS:4.0

Links
BCM HMP Project

Submission
BCM; 2009-01-14

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