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Dickeya zeae strain MS1 isolate 6-4-1

Identifiers
BioSample: SAMN01991085; Sample name: MS1; SRA: SRS404340
Organism
Dickeya zeae MS1
cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya; Dickeya zeae
Attributes
collection dateSep-2009
geographic locationChina: Guangzhou
hostBanana
isolation sourceBanana affected by bacterial soft rot
tissuePseudostem
environment biomeTropical fruits
diseaseBacterial soft rot
disease stageVascular discoloration
sample typeCulture
strainMS1
isolate6-4-1
Description

Dickeya zeae strain MS1 is the causal bacterium of banana bacterial soft rot. The disease was characterized by an odorous soft rot of the center of the rhizome. The rot progressed up the pseudostem, destroying the growing point and causing internal decay, and often accompanied by vascular discoloration. However it shows specific gray thallus in culturing compared with other Dickeya pathogens, and is short of the phytotoxin against a range of bacterial pathogens compared with other D. zeae strains. The purpose of this study is to sequence the whole genome to understand the epidemiology and comparative genomics of this pathogen with other Dickeya strains.

Submission
Plant Protection Research Institute, Guangdong Academy of Agricultural Science, P. R. China, Jingxin Zhang; 2013-03-25

Supplemental Content

Download related SRA data

Show RUNs Hide RUNs
Accession Spots Bases Download
SRS404340 777,832 408.0M 864.6M
SRX255441 777,832 408.0M 864.6M
SRR797504 777,832 408.0M 864.6M

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