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MIGS Cultured Bacterial/Archaeal sample from Arcobacter butzleri JV22

Identifiers
BioSample: SAMN00210774; SRA: SRS172368
Organism
Arcobacter butzleri JV22
cellular organisms; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter; Arcobacter butzleri
Package
MIGS: cultured bacteria/archaea; version 4.0
Attributes
collection datenot determined
estimated size2253000
isolation and growth conditionnot determined
hostHomo sapiens
latitude and longitudenot determined
environment biometerrestrial biome [ENVO:00000446]
environment featureHomo sapiens-associated habitat [ENVO:00009003]
investigation typemissing
host taxonomy ID9606 (9606)
project nameArcobacter butzleri JV22
geographic locationnot determined
source material identifiersBEI HM-298
environment materialbiological product [ENVO:02000043]
reference for biomaterialnot determined
number of repliconsnot determined
environmental packagemissing
strainJV22
isolation sourcegastrointestinal tract
finishing strategy (depth of coverage)Level 2: High-Quality Draft33.58x;78
project_typeReference Genome
misc_param: HMP body sitenot determined
nucleic acid extractionnot determined
assemblyNewbler v. 2.0-01162009
misc_param: HMP supersitegastrointestinal_tract
sophttp://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
sequencing method454-Paired-end
Description

Arcobacter butzleri str. JV22

Keywords: GSC:MIxS;MIGS:4.0

Links
Homo sapiens Microbiome Project at Baylor College of Medicine
BioProject
PRJNA53195 Arcobacter butzleri JV22
Retrieve all samples from this project

Submission
BCM; 2011-02-09
Accession:
SAMN00210774
ID:
210774

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