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MIGS Cultured Bacterial/Archaeal sample from Streptococcus mitis ATCC 6249

Identifiers
BioSample: SAMN00116813; SRA: SRS118346
Organism
Streptococcus mitis ATCC 6249
cellular organisms; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus mitis
Package
MIGS: cultured bacteria/archaea; version 4.0
Attributes
collection datenot determined
estimated size1898000
hostHomo sapiens
source material identifiersATCC 6249, BCRC 36273
environment featureHomo sapiens-associated habitat [ENVO:00009003]
investigation typemissing
host taxonomy ID9606 (9606)
project nameStreptococcus mitis ATCC 6249
geographic locationnot determined
environment biometerrestrial biome [ENVO:00000446]
environment materialbiological product [ENVO:02000043]
reference for biomaterialnot determined
latitude and longitudenot determined
isolation and growth conditionnot determined
environmental packagemissing
strainATCC 6249
number of repliconsnot determined
finishing strategy (depth of coverage)Level 2: High-Quality Draft50.8x;20
sophttp://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
project_typeReference Genome
misc_param: HMP body sitenot determined
nucleic acid extractionnot determined
assemblyNewbler v. 2.3-10192009
misc_param: HMP supersiteoral
sequencing method454-Paired-end
Description

Streptococcus mitis strain ATCC 6249

Keywords: GSC:MIxS;MIGS:4.0

Links
Human Microbiome Project at Baylor College of Medicine
BioProjects
PRJNA224116
Retrieve all samples from this project

PRJNA50515 Streptococcus mitis ATCC 6249
Retrieve all samples from this project

Submission
BCM; 2010-10-28
Accession:
SAMN00116813
ID:
116813

Supplemental Content

Download related SRA data

Show RUNs Hide RUNs
Accession Spots Bases Download
SRS118346 284,690 121.6M 288.4M
SRX029567 284,690 121.6M 288.4M
SRR070555 284,690 121.6M 288.4M

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