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MIGS Cultured Bacterial/Archaeal sample from Lactobacillus johnsonii ATCC 33200

Identifiers
BioSample: SAMN00001472; Sample name: BCM-HMP0049; SRA: SRS001937
Organism
Lactobacillus johnsonii ATCC 33200
cellular organisms; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus johnsonii
Package
MIGS: cultured bacteria/archaea; version 4.0
Attributes
strainATCC 33200
estimated size1773000
culture collectionATCC:33200
environment featureHomo sapiens-associated habitat [ENVO:00009003]
investigation typemissing
host taxonomy ID9606 (9606)
environment materialbiological product [ENVO:02000043]
number of repliconsnot determined
reference for biomaterialnot determined
geographic locationnot determined
environment biometerrestrial biome [ENVO:00000446]
latitude and longitudenot determined
environmental packagemissing
collection datenot determined
hostHomo sapiens
isolation and growth conditionnot determined
source material identifiersATCC 33200, DSM 10533
project nameLactobacillus johnsonii ATCC 33200
isolation sourcemissing
misc_param: HMP supersiteurogenital_tract
project_typeReference Genome
nucleic acid extractionnot determined
finishing strategy (depth of coverage)Level 5: Non-contiguous Finished103.24x;52
sophttp://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
sequencing method454-GS-FLX, Illumina, Sanger
assemblyNewbler v. 1.1.03.24
misc_param: HMP body sitenot determined
Description

Lactobacillus johnsonii ATCC 33200

Keywords: GSC:MIxS;MIGS:4.0

Links
BCM HMP Project
BioProjects
PRJNA224116
Retrieve all samples from this project

PRJNA31495 Lactobacillus johnsonii ATCC 33200
Retrieve all samples from this project

Submission
BCM; 2009-01-08
Accession:
SAMN00001472
ID:
1472

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