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whole genome assembly of NAM founder line NC358

Identifiers
BioSample: SAMEA5313317; SRA: ERS3120561
Organism
Zea mays
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Attributes
agesame as dev stage
biomaterial providerGRIN-Global
cultivarNC358
development stage2-Leaf (V2)
genotypeInbred lines
phenotypewild type
sample nameZm00037a
sample typetissue sample
sexmonecious
source material identifiersAmes 27175
temperature27�C
treatment48 hour dark treatment was done before tissue harvest to reduce carbohydrates, additional tissue was harvested after two new leaves emerged. Total of 35g tissue was harvested from each line for high molecular weight sequencing
ENA-CHECKLISTERC000035
ENA-FIRST-PUBLIC2020-01-09T06:47:21Z
ENA-LAST-UPDATE2019-01-31T19:19:07Z
External IdSAMEA5313317
INSDC center nameMaizeGDB
INSDC first public2020-01-09T06:47:21Z
INSDC last update2019-01-31T19:19:07Z
INSDC statuspublic
Submitter IdZm00037a
common namemaize
geo_locationUSA: Ames
scientific_nameZea mays
BioProjects
PRJEB32404 Reads for NC358 associated with the Maize Nested Association Mapping (NAM) genome sequencing and assembly project
Retrieve all samples from this project

PRJEB31061 Maize Nested Association Mapping (NAM) genome sequencing and assembly project
Retrieve all samples from this project

Submission
EBI; 2020-01-10
Accession:
SAMEA5313317
ID:
13822879

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