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Accession: PRJNA66313 ID: 66313

human lung metagenome

Viruses from cystic fibrosis lung tissue Metagenome

Uncultured viral communities from cystic fibrosis lung tissue. Viral DNA was extracted from two sets of lungs: one post-mortem and one ex-plant.
AccessionPRJNA66313
Data TypeGenome sequencing, Metagenome
ScopeEnvironment
Organismhuman lung metagenome[Taxonomy ID: 433733]
unclassified sequences; metagenomes; organismal metagenomes; human lung metagenome
Publications
  • Willner D et al., "Case studies of the spatial heterogeneity of DNA viruses in the cystic fibrosis lung.", Am J Respir Cell Mol Biol, 2011 Oct 6;46(2):127-31
  • Lysholm F et al., "Characterization of the viral microbiome in patients with severe lower respiratory tract infections, using metagenomic sequencing.", PLoS One, 2012 Feb 15;7(2):e30875
SubmissionRegistration date: 26-Apr-2011
San Diego State University
Locus Tag PrefixGES
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)5
Genomic DNA3
Genomic RNA2
Protein Sequences5
Publications
PubMed2
PMC2

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