Display Settings:

Format

Send to:

Choose Destination

Links from BioProject

Accession: PRJNA167910 ID: 167910

NHGRI Large Scale Sequencing Program for Organismal Sequencing

This project collates a significant number of projects carried out under the NHGRI Large Scale Sequencing Program and aimed primarily at generating de novo organism sequences.
AccessionPRJNA167910
TypeGenome sequencing, Transcriptome or Gene expression, Umbrella project (Subtype:Funding initiative)
SubmissionRegistration date: 4-Jun-2012
NHGRI
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)13879652
WGS master150
TSA master51
Genomic DNA3409
Transcript8059382
SRA Experiments2787
Capillary Traces (Trace Archive)1
Protein Sequences1183348
Publications
PubMed88
PMC50
Other datasets
BioSample1259
GEO DataSets3
Assembly145
GEO Data Details
ParameterValue
Data volume, Spots36891235
Data volume, Processed Mbytes801
Data volume, Supplementary Mbytes1611
SRA Data Details
ParameterValue
Data volume, Gbases32,938
Data volume, Tbytes25.13
This project encompasses the following 150 sub-projects:
Project TypeNumber of Projects
Clone ends1
BioProject
accession
OrganismTitle
PRJNA20293Phlebotomus papatasiBAC library construction and BAC end sequencing for Phlebotomus papatasi (Washington University Genome...)
Genome sequencing

10
74
10
13
107
BioProject
accession
Assembly
level
NameTitle
PRJNA20303 Scaffolds or contigsAcanthamoeba castellaniiAcanthamoeba castellanii (Baylor College of Medicine)
PRJNA13657 Scaffolds or contigsAcyrthosiphon pisumGenome sequencing of the pea aphid (Baylor College of Medicine)
PRJNA20441 SRA or TraceAncylostoma caninumDog hookworm that attaches to the intestine of its host causing diarrhea and anemia. (Washington University Genome...)
PRJNA18787 ChromosomesAnolis carolinensisAn arboreal lizard native to southeastern United States and some Caribbean islands (Broad Institute)
PRJNA10625 ChromosomesApis melliferaApis mellifera genome sequencing project (Human Genome Sequencing Center)
List all 107 'Genome sequencing' projects...
Transcriptome or Gene expression31
BioProject
accession
OrganismTitle
PRJNA12840Ancylostoma caninumAncylostoma caninum (Washington University Genome...)
PRJNA78917Anolis carolinensisAnolis carolinensis Genome sequencing and Transcriptome or Gene expression (Broad Institute)
PRJNA51483Apis melliferaApis mellifera strain MA transcriptome sequencing project (Baylor College of Medicine)
PRJNA51481Apis melliferaApis mellifera transcriptome sequencing project (Baylor College of Medicine)
PRJNA77701Aplysia californicaAplysia californica Genome sequencing and Transcriptome or Gene expression (Broad Institute)
List all 31 'Transcriptome or Gene expression' projects...
Umbrella Comparative genomics project10
BioProject
accession
NameTitle
PRJNA67511AnophelesAnopheles 16 Genomes Project (Broad Institute)
PRJNA170427BCM-HGSC Marine Mammal Genome ProjectsBCM-HGSC Marine Mammal Genome Projects (Baylor College of Medicine)
PRJNA175043Black Yeast Multiispecies ProjectBlack Yeast Multiispecies Project (Broad Institute)
PRJNA167911NasoniaParasitoid Wasp Sequencing Project (NHGRI)
PRJNA71873Origins of Multicellularity Sequencing projectProtist and Fungi sequencing projects to investigate the origins of multicellularity (Broad Institute)
List all 10 'Umbrella Comparative genomics project' projects...
Variation1
BioProject
accession
OrganismTitle
PRJNA142399Mus musculusaCGH data from mouse APL tumors (Washington University in...)

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...