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Accession: PRJDB2892 ID: 248804

Bacteria

The NBRC Genome Sequencing Project for Pollutant-degrading bacteria

The microbial biodegradation of pollutants is attracting attention to find feasible ways to clean-up contaminated environments. More...

Accession	PRJDB2892
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications (total 3) Less...	Shimodaira J et al., "Draft Genome Sequence of Comamonas sp. Strain E6 (NBRC 107749), a Degrader of Phthalate Isomers through the Protocatechuate 4,5-Cleavage Pathway.", Genome Announc, 2015 Jun 18;3(3) More... Shimodaira J et al., "Draft Genome Sequence of Comamonas sp. Strain E6 (NBRC 107749), a Degrader of Phthalate Isomers through the Protocatechuate 4,5-Cleavage Pathway.", Genome Announc, 2015 Jun 18;3(3) Yee L et al., "Complete Genome Sequence of a Dimethyl Sulfide-Utilizing Bacterium, Acinetobacter guillouiae Strain 20B (NBRC 110550).", Genome Announc, 2014 Oct 16;2(5) Miura T et al., "Complete Genome Sequence of an Alkane Degrader, Alcanivorax sp. Strain NBRC 101098.", Genome Announc, 2014 Aug 14;2(4) Less...
Submission	Registration date: 26-Sep-2014 National Institute of Technology and Evaluation
Related Resources	Whole Genome Shotgun Project
Relevance	Bioremediation

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	231
WGS master	4
Genomic DNA	3
SRA Experiments	5
Protein Sequences	13831
Publications
PubMed	3
PMC	3
Other datasets
BioSample	8
Assembly	7

Assembly details:

Assembly level

Number of Assemblies

Complete genome

Complete genome

Contig

3
4
7

Assembly	Level	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_002370525.2			1	SAMD00018975	NBRC 110550	Acinetobacter guillouiae
GCA_001010505.1			1	SAMD00018424	NBRC 101098	Alcanivorax sp. NBRC 101098
GCA_001602235.1		BDAS00000000		SAMD00048769	NBRC 102024	Alcanivorax sp. NBRC 102024
GCA_001602255.1		BDAT00000000		SAMD00048770	NBRC 102028	Alcanivorax sp. NBRC 102028
GCA_001010305.1		BBXH00000000		SAMD00029743	E6	Comamonas sp. E6
GCA_001010485.1			1	SAMD00018699	UCH007	Dehalococcoides sp. UCH007
GCA_000787655.1		BBNC00000000		SAMD00020208	YDK221	Pseudomonas putida

SRA Data Details

Parameter	Value
Data volume, Gbases	3
Data volume, Mbytes	1959

Supplemental Content

Related information

Assembly
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BioSample
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Full text in PMC
PMC links
Genome
Related Genomes
Genomic DNA
Link to genomic DNA records
Nucleotide
Related Nucleotide entry
Protein
Related Proteins
PubMed
PubMed Links
Related Genes
Genes related to a genome project
SRA
All related SRA Experiments
Taxonomy
Taxonomy Links
WGS master
Link to WGS master record(s)

Related Resources

Whole Genome Shotgun Project
Whole Genome Shotgun Project

LinkOut to external resources

GOLD Multi-Isolate BioProject - 248804 [Genomes On Line Database]
GOLD Multi-Isolate BioProject - 248804
Genomes On Line Database
2916661554: Acinetobacter guillouiae NBRC 110550 [Integrated Microbial Genomes]
2916661554: Acinetobacter guillouiae NBRC 110550
Integrated Microbial Genomes
2713896923: Alcanivorax sp. NBRC 102028 [Integrated Microbial Genomes]
2713896923: Alcanivorax sp. NBRC 102028
Integrated Microbial Genomes
2713896922: Alcanivorax sp. NBRC 102024 [Integrated Microbial Genomes]
2713896922: Alcanivorax sp. NBRC 102024
Integrated Microbial Genomes

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