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Accession: PRJNA46305 ID: 46305

Human Microbiome Project (HMP) Demonstration Projects

The human microbiome and human health and disease

HMP demonstration projects were developed to investigate the potential relationship of changes in the human microbiota to human health and disease. High throughput genomics technologies were used to assess whether the microbiota in a specific region on/in the human body plays a role in contributing to health status.
Related Resources:
Project Type:Umbrella project, Genome sequencing, Phenotype or Genotype (Subtype:Funding initiative)
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)247891
Genomic DNA247864
SRA Experiments9201
Capillary Traces (Trace Archive)1
Other datasets
BioSample12118
SRA Data Details
ParameterValue
Data volume, Gbases4,378
Data volume, Tbytes2.78
Human Microbiome Project (HMP) Demonstration Projects encompasses the following 20 sub-projects:
Project TypeNumber of Projects
Metagenome6
BioProject
accession
OrganismTitle
PRJNA46321human metagenomeMetagenomic Analysis of the Structure and Function of the Human Gut Microbiota in Crohn's Disease (University of Maryland Baltimore)
PRJNA46333human metagenomeGene-Environment Interactions at the Skin Surface (NISC - NIH Intramural Sequencing...)
PRJNA46335human metagenomeThe Human Virome In Children And Its Relationship To Febrile Illness (Washington University)
PRJNA46877human metagenomeThe Vaginal Microbiome: Disease, Genetics and the Environment (Virginia Commonwealth University)
PRJNA46879human metagenomeDiet, Genetic Factors, and the Gut Microbiome in Crohn's Disease (University of Pennsylvania)
List all 6 'Metagenome' projects...
Targeted Locus (Loci)14
BioProject
accession
OrganismTitle
PRJNA174514human gut metagenome16S Sequencing of Human Gut Microbiome in Crohn's Disease Metagenome (University of Maryland Institute...)
PRJNA46307human metagenomeForegut microbiome in development of esophageal adenocarcinoma (New York University School...)
PRJNA46309human metagenomeEvaluation of the cutaneous microbiome in psoriasis (New York University School...)
PRJNA46311human metagenomeThe Vaginal Microbiome: Disease, Genetics and the Environment (Virginia Commonwealth University)
PRJNA46313human metagenomeDiet, Genetic Factors, and the Gut Microbiome in Crohn's Disease (University of Pennsylvania)
List all 14 'Targeted Locus (Loci)' projects...
Submission:
Registration date: 3-Mar-2010
NIH Human Microbiome Consortium

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