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Accession: PRJNA46305 ID: 46305

Human Microbiome Project (HMP) Demonstration Projects

The human microbiome and human health and disease

HMP demonstration projects were developed to investigate the potential relationship of changes in the human microbiota to human health and disease. High throughput genomics technologies were used to assess whether the microbiota in a specific region on/in the human body plays a role in contributing to health status.
Related Resources:
Project Type:Umbrella project (Subtype:Funding initiative)
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (Genomic DNA)247864
SRA Experiments8365
Capillary Traces (Trace Archive)1
Other datasets
BioSample37279
Genotype and Phenotype (dbGaP)15
SRA Data Details
ParameterValue
Data volume, Gbases3,509
Data volume, Tbytes2.16
Human Microbiome Project (HMP) Demonstration Projects encompasses the following 20 sub-projects:
Project TypeNumber of Projects
Metagenome6
BioProject
accession
OrganismTitle
PRJNA46321human metagenomeHuman Gut Microbiome in Crohn's Disease (University of Maryland Baltimore)
PRJNA46333human metagenomeHuman Skin Microbiome in Disease States (NISC - NIH Intramural Sequencing...)
PRJNA46335human metagenomeHuman Virome in Febrile Illness (Washington University)
PRJNA46877human metagenomeHuman Vaginal Microbiome (Virginia Commonwealth University)
PRJNA46879human metagenomeHuman Gut Microbiome in Crohn's Disease (University of Pennsylvania)
List all 6 'Metagenome' projects...
Targeted Locus (Loci)14
BioProject
accession
OrganismTitle
PRJNA174514human gut metagenomehuman gut metagenome (University of Maryland Institute...)
PRJNA46307human metagenome16S rRNA from Human Foregut Microbiome in Esophageal Adenocarcinoma (New York University School...)
PRJNA46309human metagenome16S rRNA from Human Cutaneous Microbiome in Psoriasis (New York University School...)
PRJNA46311human metagenome16S rRNA from Human Vaginal Microbiome (Virginia Commonwealth University)
PRJNA46313human metagenome16S rRNA from Human Gut Microbiome in Crohn's Disease (University of Pennsylvania)
List all 14 'Targeted Locus (Loci)' projects...
Submission:
Registration date: 3-Mar-2010
NIH Human Microbiome Consortium

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