The human microbiome refers to the community of microorganism that live in or on the human body. The Human Microbiome Project (HMP) is an NIH Roadmap project that was initiated to generate resources to enable comprehensive characterization of the human microbiota and analysis of its role in human health and disease. The HMP centers will sequence the genomes of a set of microoganisms that have been previously isolated from the human body. In addition, samples from the digestive tract, mouth, skin, nose, and female urogenital tract of human volunteers will be sequenced for 16S ribosomal RNA analysis and considered for metagenomic analysis.
Project Type:Umbrella project (Subtype:Funding initiative)
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 409368 |
| WGS master | 1193 |
| Genomic DNA | 408175 |
| SRA Experiments | 8422 |
| Capillary Traces (Trace Archive) | 1 |
| Protein Sequences | 3479648 |
| Publications |
| PubMed | 41 |
| PMC | 17 |
| Other datasets |
| BioSample | 90938 |
| Genotype and Phenotype (dbGaP) | 16 |
NIH Human Microbiome Project (HMP) Roadmap Project encompasses the following 4 sub-projects:
| Project Type | Number of Projects |
| Umbrella project | 4 |
BioProject
accession | Name | Title |
|---|
| PRJNA48489 | Human Microbiome Project (HMP) 16S rRNA Gene Diversity | Human Microbiome Project (HMP) 16S rRNA Gene Diversity (NIH Human Microbiome Consortium) | | PRJNA46305 | Human Microbiome Project (HMP) Demonstration Projects | Human Microbiome Project (HMP) Demonstration Projects (NIH Human Microbiome Consortium) | | PRJNA43017 | Human Microbiome Project (HMP) Metagenome Projects | Human Microbiome Project (HMP) Metagenome Projects (NIH Human Microbiome Consortium) | | PRJNA28331 | Human Microbiome Project (HMP) Reference Genomes | Human Microbiome Project (HMP) Reference Genomes (NIH Human Microbiome Consortium) |
|
Publications:
Submission:
Registration date: 2-Jan-2010
NIH Human Microbiome Consortium