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Accession: PRJNA315668 ID: 315668

Elizabethkingia anophelis

Elizabethkingia Outbreak 2015-2016

See Genome Information for Elizabethkingia anophelis
Whole Genome Sequencing of Elizabethkingia anophelis isolates from the outbreak investigation 2015-2016.
AccessionPRJNA315668
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismElizabethkingia anophelis[Taxonomy ID: 1117645]
Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales; Weeksellaceae; Elizabethkingia; Elizabethkingia anophelis
Publications
  • Perrin A et al., "Evolutionary dynamics and genomic features of the Elizabethkingia anophelis 2015 to 2016 Wisconsin outbreak strain.", Nat Commun, 2017 May 24;8:15483
  • Nicholson AC et al., "Complete Genome Sequences of Four Strains from the 2015-2016 Elizabethkingia anophelis Outbreak.", Genome Announc, 2016 Jun 16;4(3)
SubmissionRegistration date: 11-Apr-2016
Bacterial Special Pathogens Branch (CDC)
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)57
WGS master53
Genomic DNA4
SRA Experiments69
Protein Sequences13774
Publications
PubMed2
PMC2
Other datasets
BioSample69
Assembly57
Assembly details:
Assembly levelNumber of Assemblies
4
53
57
AssemblyLevelWGSChrsBioSampleStrainTaxonomy
GCA_001596175.2Complete genomeSAMN04567744
CSID_3015183678
GCA_001618465.2Complete genomeSAMN04590540
CSID_3015183684
GCA_001618505.2Complete genomeSAMN04567738
CSID_3000521207
GCA_001618545.2Complete genomeSAMN04567745
CSID_3015183681
GCA_016076955.1ContigAAXVRU000000000
SAMN04567736
CSID_3000516071
GCA_016087935.2ContigAAXWHN000000000
SAMN04590524
CSID_3000516028
GCA_016087995.2ContigAAXWHM000000000
SAMN04590525
CSID_3000516066
GCA_016087955.2ContigAAXWHP000000000
SAMN04590521
CSID_3000515961
GCA_016087975.2ContigAAXWHL000000000
SAMN04590523
CSID_3000516027
GCA_016087895.2ContigAAXWHJ000000000
SAMN04590526
CSID_3000516091
GCA_016087915.2ContigAAXWHH000000000
SAMN04590528
CSID_3000521199
GCA_016087835.2ContigAAXWHG000000000
SAMN04590530
CSID_3000521201
GCA_016087855.2ContigAAXWHI000000000
SAMN04590529
CSID_3000521200
GCA_016087815.2ContigAAXWHF000000000
SAMN04590531
CSID_3000521202
GCA_016087795.2ContigAAXWHE000000000
SAMN04590533
CSID_3000521205
GCA_016087775.2ContigAAXWHC000000000
SAMN04590532
CSID_3000521203
GCA_016087755.2ContigAAXWHD000000000
SAMN04590534
CSID_3000521206
GCA_016087735.2ContigAAXWHB000000000
SAMN04590535
CSID_3015183672
GCA_016087715.2ContigAAXWGX000000000
SAMN04590537
CSID_3015183677
GCA_016087695.2ContigAAXWHA000000000
SAMN04590536
CSID_3015183676
GCA_016087645.2ContigAAXWGW000000000
SAMN04590539
CSID_3015183683
GCA_016087615.2ContigAAXWGY000000000
SAMN04590538
CSID_3015183682
GCA_016087555.2ContigAAXWGR000000000
SAMN04913770
CSID_3000516133
GCA_016087675.2ContigAAXWGV000000000
SAMN04590541
CSID_3015183688
GCA_016087575.2ContigAAXWGS000000000
SAMN04913772
CSID_3000516136
GCA_016087595.2ContigAAXWGU000000000
SAMN04913771
CSID_3000516134
GCA_016088415.2ContigAAXWGT000000000
SAMN04913773
CSID_3000516137
GCA_016088395.2ContigAAXWGQ000000000
SAMN04913774
CSID_3000516189
GCA_016088195.2ContigAAXWGO000000000
SAMN04913776
CSID_3000516277
GCA_016088015.2ContigAAXWGN000000000
SAMN04913778
CSID_3000516279
GCA_016088315.2ContigAAXWGP000000000
SAMN04913775
CSID_3000516276
GCA_016087365.2ContigAAXWGL000000000
SAMN04913777
CSID_3000516278
GCA_016087525.2ContigAAXWGM000000000
SAMN04913789
CSID_3000516362
GCA_016087465.2ContigAAXWGK000000000
SAMN04913791
CSID_3000516626
GCA_016087335.2ContigAAXWGI000000000
SAMN04913794
CSID_3000521792
GCA_016087515.2ContigAAXWGJ000000000
SAMN04913790
CSID_3000516625
GCA_016087495.2ContigAAXWGG000000000
SAMN04913792
CSID_3000516627
GCA_016087415.2ContigAAXWGF000000000
SAMN04913795
CSID_3000521794
GCA_016088595.2ContigAAXWHS000000000
SAMN04567743
CSID_3015183675
GCA_016088535.2ContigAAXWHR000000000
SAMN04567746
CSID_3015183689
GCA_016088075.2ContigAAXWHQ000000000
SAMN04590520
CSID_3000515959
GCA_016088035.2ContigAAXWHO000000000
SAMN04590522
CSID_3000515963
GCA_016087875.2ContigAAXWHK000000000
SAMN04590527
CSID_3000521198
GCA_016088795.2ContigAAXWIB000000000
SAMN04567729
CSID_3000515960
GCA_016088655.2ContigAAXWHY000000000
SAMN04567731
CSID_3000516026
GCA_016088775.2ContigAAXWIC000000000
SAMN04567730
CSID_3000515962
GCA_016088665.2ContigAAXWHU000000000
SAMN04567739
CSID_3000521208
GCA_016088715.2ContigAAXWIA000000000
SAMN04567737
CSID_3000521204
GCA_016088675.2ContigAAXWHV000000000
SAMN04567740
CSID_3000521209
GCA_016088635.2ContigAAXWHW000000000
SAMN04567741
CSID_3000521210
GCA_016088615.2ContigAAXWHT000000000
SAMN04567742
CSID_3015183673
GCA_016087435.2ContigAAXWGE000000000
SAMN04913796
CSID_3000522106
GCA_016088555.2ContigAAXWGC000000000
SAMN04913769
CSID_3000516072
GCA_016088455.2ContigAAXWGB000000000
SAMN04567732
CSID_3000516067
GCA_016088435.2ContigAAXWGA000000000
SAMN04567733
CSID_3000516068
GCA_016088495.2ContigAAXWFZ000000000
SAMN04567734
CSID_3000516069
GCA_016088475.2ContigAAXWFY000000000
SAMN04567735
CSID_3000516070
SRA Data Details
ParameterValue
Data volume, Gbases43
Data volume, Mbytes24323

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