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Genome Information for Agrobacterium tumefaciens
Agrobacterium tumefaciens strain C58. This strain is a biovar 1 nopaline-producing strain originally isolated from a cherry tree tumor. More...
Agrobacterium tumefaciens strain C58. This strain is a biovar 1 nopaline-producing strain originally isolated from a cherry tree tumor. The genome consists of one circular and one linear chromsome and two plasmids, one of which is the conjugative Ti plasmid that transfers the T-DNA. This genome was sequenced by Cereon Genomics but ongoing work in the Agrobacterium genomics community has led to a merged record containing the Cereon sequence and merged annotation that is considered the gold standard comprised of annotation work at Cereon and the University of Washington. Less...
Project Data Type: Genome sequencing; Locus Tag Prefix: AGR
Attributes: Scope: Monoisolate; Material: Genome; Capture: Whole; Method type: Sequencing;
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide | 4 |
| SRA Experiments | 33 |
| Protein Sequences | 5355 |
| Publications |
| PubMed | 2 |
| Other datasets |
| BioSample | 30 |
Publications:
- Wood DW et al., "The genome of the natural genetic engineer Agrobacterium tumefaciens C58.", Science, 2001 Dec 14;294(5550):2317-23
- Goodner B et al., "Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58.", Science, 2001 Dec 14;294(5550):2323-8
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[Taxonomy ID: 176299] Biological Properties:
Morphology | Environment | Phenotype |
|---|
Gram: Negative
Shape: Bacilli
Motility: Yes
| Oxygen Req: Aerobic
Optimum Temperature: 25-28
Temperature Range: Mesophilic
Habitat: Multiple
| Disease: Tumors
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Submission:
Registration date: 25-Feb-2003
Cereon