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GRCh38

Description:
Genome Reference Consortium Human Build 38
Organism name:
Homo sapiens
Submitter:
Genome Reference Consortium
Date:
2013/12/17
Synonyms:
hg38
Assembly type:
haploid-with-alt-loci
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
reference-genome
GenBank Assembly ID:
GCA_000001405.15 (latest)
RefSeq Assembly ID:
GCF_000001405.26 (latest)
RefSeq Assembly and GenBank Assembly Identical:
yes

IDs: 88331 [UID] 883148 [GenBank] 884148 [RefSeq]

See Genome Information for Homo sapiens

There are 13 assemblies for this organism

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History (Show revision history)

Global statistics

Number of regions with alternate loci or patches207
Total sequence length3,209,286,105
Total assembly gap length159,970,007
Gaps between scaffolds349
Number of scaffolds735
Scaffold N5067,794,873
Number of contigs1,385
Contig N5056,413,054
Total number of chromosomes and plasmids25

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
ALT_REF_LOCI_1
ALT_REF_LOCI_10
ALT_REF_LOCI_11
ALT_REF_LOCI_12
ALT_REF_LOCI_13
ALT_REF_LOCI_14
ALT_REF_LOCI_15
ALT_REF_LOCI_16
ALT_REF_LOCI_17
ALT_REF_LOCI_18
ALT_REF_LOCI_19
ALT_REF_LOCI_2
ALT_REF_LOCI_20
ALT_REF_LOCI_21
ALT_REF_LOCI_22
ALT_REF_LOCI_23
ALT_REF_LOCI_24
ALT_REF_LOCI_25
ALT_REF_LOCI_26
ALT_REF_LOCI_27
ALT_REF_LOCI_28
ALT_REF_LOCI_29
ALT_REF_LOCI_3
ALT_REF_LOCI_30
ALT_REF_LOCI_31
ALT_REF_LOCI_32
ALT_REF_LOCI_33
ALT_REF_LOCI_34
ALT_REF_LOCI_35
ALT_REF_LOCI_4
ALT_REF_LOCI_5
ALT_REF_LOCI_6
ALT_REF_LOCI_7
ALT_REF_LOCI_8
ALT_REF_LOCI_9
non-nuclear

Regions

NameLocation
REGION1081:2448811-2791270
PRAME_REGION_11:13075113-13312803
REGION1091:30352191-30456601
CEN11:122026460-125184587
1Q211:144488706-144674781
REGION21:153700531-153865738
MTX11:155210382-155305245
REGION31:198370083-198725175
REGION1101:234163457-234211370
REGION1111:242987893-243895211
REGION1121:245305697-245727576
OLFACTORY_REGION_31:248352027-248511794
REGION1132:728878-860300
REGION1142:1204935-1273724
REGION1152:1315177-1541254
REGION1212:3391898-3511146
REGION42:36225959-36363315
REGION1162:90218337-90402511
CEN22:92188146-94090557
REGION1172:115908855-116040717
REGION1182:116874515-116981849
REGION1192:131697037-131806107
REGION442:148934069-149024119
SPC252:168830363-168937194
REGION1202:241787903-242117508
REGION733:11815268-11986497
REGION1223:20277967-20382602
CEN33:90772459-93655574
REGION1233:125665519-125883802
REGION53:151589366-151759498
REGION1243:154111571-154282042
REGION1253:166300784-166544173
REGION1263:184425340-184533338
MUCIN_REGION_23:195629504-195827492
REGION1273:197397856-197558882
REGION1283:198047549-198235559
REGION1294:21521367-21734410
REGION64:34517955-34883858
CEN44:49708101-51743951
REGION1304:55678095-55785754
UGT2B174:68306359-69010457
REGION1314:120164199-120317014
REGION74:155835378-155987264
REGION1324:186920392-187048061
REGION1334:188341423-188542359
REGION1344:189361858-190041016
REGION1355:502435-626896
SLC12A75:981494-1161361
SLC6A35:1318299-1509772
REGION95:12681426-12744010
REGION615:29036498-29254469
REGION1365:33800665-33963236
CEN55:46485901-50059807
SMA5:69216819-71614443
MCTP15:95169857-95254491
REGION1375:125279466-125444151
REGION85:162373667-162541648
REGION1385:177865465-177996111
MHC6:28510120-33480577
CEN66:58553889-59829934
REGION1396:65774814-65944033
REGION1406:68262879-68402208
REGION106:79350008-79446911
REGION1416:127654803-128521146
REGION1426:166220580-166285980
REGION996:168796076-168951646
REGION1436:169724799-169919706
REGION1446:170272763-170535221
REGION1457:10001-198548
CEN77:58169654-60828234
HET77:61377789-61528020
REGION1467:76500982-76722751
REGION1477:103086563-103242097
REGION117:141633409-141746583
TRB7:142038121-143088503
REGION1487:148214874-148487860
REGION1497:157697532-157820586
REGION1507:158267495-158477174
REGION1518:718410-2817440
DEFENSIN_REGION_18:7308874-7617127
ADAM58:39094318-39873856
CEN88:44033745-45877265
REGION1528:57173351-57303398
REGION1538:128554723-128925740
REGION1548:141333447-141461079
REGION1558:141766834-141800272
REGION1568:143009713-143163398
REGION1578:143509961-143828794
REGION1588:144628750-144757761
REGION149:7428994-7577169
CEN99:43236168-45518558
REGION139:69413743-69477097
MAMDC29:70024113-70189318
REGION159:88179047-88227980
LPPR19:100948798-101378291
REGION1610:27285655-27417608
CEN1010:39686683-41593521
REGION15910:42103240-42298939
REGION1810:45175233-45468971
REGION16010:77761309-77931226
REGION10411:470360-678681
MUCIN_REGION_111:937258-1150311
KRTAP_REGION_211:1523474-1740879
REGION10511:2767814-3065846
OLFACTORY_REGION_211:7779133-7972558
REGION1911:25170407-25319080
CEN1111:51078349-54425074
OLFACTORY_REGION_111:56189252-56873567
REGION10611:69165291-69229344
REGION10711:134773600-134962792
REGION5012:10001-173298
PRH1_PRR412:10801295-11377386
REGION2112:27996034-28110778
OVOS212:31111480-31347345
CEN1212:34769408-37185252
REGION2212:57932737-58092755
REGION2312:58929265-59060870
REGION2412:101111599-101258295
REGION16112:123826509-123945954
REGION2012:126227198-126405474
REGION16212:130323076-130394967
REGION16312:131543020-131584984
CEN1313:16000001-18051248
REGION16413:18698351-18884136
REGION16513:25652362-25828680
REGION16613:70341886-70442876
REGION16713:89598964-89764093
REGION16813:112182875-112505943
REGION16913:113727531-113763795
CEN1414:16000001-18173523
REGION17014:91535865-91854371
IGH14:92885439-94394539
SERPIN_REGION_114:104449322-104622880
REGION17114:105533003-106860219
CEN1515:17000001-19725254
PRADER_WILLI15:21242091-23226874
REGION2515:27865714-32946929
TRIM6915:44676664-44913053
MEGF1115:65908183-66284818
REGION17215:82289984-82641774
RAB11FIP316:400855-531525
REGION17316:1871895-1933852
PAM1616:4299637-4530534
REGION17416:14427144-16998739
CEN1616:36311159-38280682
REGION2616:55772981-55968548
SNTB216:69140151-69224690
DOC2B_RPH3AL17:60001-402637
ABR17:960754-1449331
WDR8117:1569973-1767739
CEN1717:22813680-26885980
CCL5_TBC1D317:35765469-38841755
KRTAP_REGION_117:40850733-41432935
MAPT17:45309498-46903773
REGION2817:70306278-70524219
REGION17517:71584518-71819311
REGION17617:72833331-72935743
REGION3017:77220730-77299326
B3GNTL117:82922720-83103577
CEN1818:15460900-20861206
REGION17718:43667277-43773892
REGION3118:50292194-50574792
REGION3218:51662936-51821642
REGION3318:67423723-67552551
REGION3418:72933122-73024781
REGION3518:78493467-78664469
REGION3618:78934886-79088997
REGION17818:79563122-79725366
ELANE19:821158-881412
SBNO219:1107414-1158195
ZNF6619:20663141-21042381
REGION3719:21648290-21809032
REGION3919:22120850-22300666
CEN1919:24498981-27190874
REGION3819:34152260-34300950
GPI19:34350807-34392977
CEACAM_REGION_119:41456581-41682000
LRC_KIR19:54025634-55084318
REGION4020:17771102-17893471
CEN2020:26436233-30038348
REGION17920:61886306-62008187
REGION18120:63414721-63471095
REGION18020:64095055-64274842
CEN2121:10864561-12915808
REGION4121:14424141-14475471
REGION18221:17146893-17310433
REGION18321:17603695-17744061
REGION4221:22102474-22296968
REGION4321:32769079-32837937
TMEM50B21:33405429-33512559
SPATC1L21:46140942-46221322
CEN2222:12954789-15054318
IGL22:22373449-22624257
REGION18422:23354043-23516062
REGION18522:23763639-24013509
APOL522:35685234-35942668
REGION18622:36779214-36877704
APOBEC22:38884294-39011160
CYP2D622:42077656-42253758
PAR#1X:10001-2781479
REGION187X:319338-601516
CENXX:58605580-62412542
REGION188X:79965154-80097082
PAR#2X:155701383-156030895
PAR#1Y:10001-2781479
CENYY:10316945-10544039
PAR#2Y:56887903-57217415
Assembly Unit: Primary Assembly (GCF_000001305.14)
Molecule nameGenBank IDRefSeq IDUnlocalized
sequences count
Chromosome 1CM000663.2=NC_000001.119
Chromosome 2CM000664.2=NC_000002.122
Chromosome 3CM000665.2=NC_000003.121
Chromosome 4CM000666.2=NC_000004.121
Chromosome 5CM000667.2=NC_000005.101
Chromosome 6CM000668.2=NC_000006.120
Chromosome 7CM000669.2=NC_000007.140
Chromosome 8CM000670.2=NC_000008.110
Chromosome 9CM000671.2=NC_000009.124
Chromosome 10CM000672.2=NC_000010.110
Chromosome 11CM000673.2=NC_000011.101
Chromosome 12CM000674.2=NC_000012.120
Chromosome 13CM000675.2=NC_000013.110
Chromosome 14CM000676.2=NC_000014.98
Chromosome 15CM000677.2=NC_000015.101
Chromosome 16CM000678.2=NC_000016.101
Chromosome 17CM000679.2=NC_000017.113
Chromosome 18CM000680.2=NC_000018.100
Chromosome 19CM000681.2=NC_000019.100
Chromosome 20CM000682.2=NC_000020.110
Chromosome 21CM000683.2=NC_000021.90
Chromosome 22CM000684.2=NC_000022.119
Chromosome XCM000685.2=NC_000023.110
Chromosome YCM000686.2=NC_000024.101
unplacedn/an/an/a127

Assembly statistics

MoleculeSequence RoleTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
Chromosome 1AllAssembled moleculeUnlocalized scaffolds249,698,942248,956,422742,52021129231,223,641230,481,121742,520121,390,471121,390,471127,6826464013130
Chromosome 2AllAssembled moleculeUnlocalized scaffolds242,508,799242,193,529315,270972240,863,511240,548,241315,270147,687,514147,687,514161,47114140880
Chromosome 3AllAssembled moleculeUnlocalized scaffolds198,450,956198,295,559155,397761198,255,541198,100,144155,397104,529,985104,529,985155,39713130880
Chromosome 4AllAssembled moleculeUnlocalized scaffolds190,424,264190,214,555209,7091091189,962,376189,752,667209,709131,283,174131,283,174209,70988010100
Chromosome 5AllAssembled moleculeUnlocalized scaffolds181,630,948181,538,25992,68918171181,358,067181,265,37892,68946,425,90046,425,90092,6891919019190
Chromosome 6Assembled molecule170,805,9793170,078,524110,516,045106
Chromosome 7Assembled molecule159,345,9736158,970,13596,829,194107
Chromosome 8Assembled molecule145,138,6366144,768,13639,736,95759
Chromosome 9AllAssembled moleculeUnlocalized scaffolds138,688,728138,394,717294,01125214122,084,564121,790,553294,01170,114,16570,114,165176,8452121023230
Chromosome 10Assembled molecule133,797,4226133,263,00692,093,901307
Chromosome 11AllAssembled moleculeUnlocalized scaffolds135,186,938135,086,622100,316761134,634,058134,533,742100,31647,073,72647,073,726100,31610100990
Chromosome 12Assembled molecule133,275,3099133,137,82194,988,1101510
Chromosome 13Assembled molecule114,364,3281897,983,12867,794,873121
Chromosome 14AllAssembled moleculeUnlocalized scaffolds108,136,338107,043,7181,092,6202517891,660,76990,568,1491,092,62088,660,19588,660,195194,05077020200
Chromosome 15AllAssembled moleculeUnlocalized scaffolds102,439,437101,991,189448,24887185,089,57684,641,328448,24878,704,31578,704,315448,248990990
Chromosome 16AllAssembled moleculeUnlocalized scaffolds92,211,10490,338,3451,872,759109183,378,70381,805,9441,572,75943,847,66343,847,6631,872,7591711612120
Chromosome 17AllAssembled moleculeUnlocalized scaffolds83,836,42283,257,441578,9811310383,481,87182,920,216561,65554,806,56254,806,562185,59139251412120
Chromosome 18Assembled molecule80,373,2851280,089,65059,352,0792314
Chromosome 19Assembled molecule58,617,616758,440,75831,366,74219
Chromosome 20Assembled molecule64,444,1671863,944,26833,282,6596121
Chromosome 21Assembled molecule46,709,9834040,088,62333,734,175742
Chromosome 22AllAssembled moleculeUnlocalized scaffolds51,857,51650,818,4681,039,0484536940,181,01939,159,7821,021,23731,264,30131,264,301165,0502571838380
Chromosome XAssembled molecule156,040,8959154,893,03434,966,2681910
Chromosome YAllAssembled moleculeUnlocalized scaffolds57,264,65557,227,41537,2401413126,452,28826,415,04837,2406,276,1296,276,12937,2404444012120
unplacedAssembled molecule4,485,5091274,328,403161,147540
MoleculeTotal
Length
Mitochondrion MT16,569
Region
Name
LocationScaffold
Count
Total
Length
Ungapped
Length
Scaffold
N50
Spanned
Gaps
REGION1081:2448811-27912701354,444304,444354,4441
PRAME_REGION_11:13075113-133128031256,271256,271256,2710
REGION1091:30352191-304566011109,528109,528109,5280
CEN11:122026460-12518458700000
1Q211:144488706-1446747811185,285185,285185,2850
REGION21:153700531-1538657381182,439182,439182,4390
MTX11:155210382-1553052451110,268110,268110,2680
REGION31:198370083-1987251751366,580366,580366,5800
REGION1101:234163457-234211370150,25850,25850,2580
REGION1111:242987893-2438952111911,658911,658911,6580
REGION1121:245305697-2457275761425,601425,601425,6010
OLFACTORY_REGION_31:248352027-2485117942328,046328,046165,8340
REGION1132:728878-8603001136,240136,240136,2400
REGION1142:1204935-1273724170,88770,88770,8870
REGION1152:1315177-15412541223,625223,625223,6250
REGION1212:3391898-35111461120,616120,616120,6160
REGION42:36225959-363633151143,390143,390143,3900
REGION1162:90218337-904025112347,199347,199214,1580
CEN22:92188146-9409055700000
REGION1172:115908855-1160407171138,019138,019138,0190
REGION1182:116874515-1169818491110,395110,395110,3950
REGION1192:131697037-1318061071110,099110,099110,0990
REGION442:148934069-149024119196,13196,13196,1310
SPC252:168830363-1689371941123,821123,821123,8210
REGION1202:241787903-2421175083496,962496,962161,5780
REGION733:11815268-119864971173,151173,151173,1510
REGION1223:20277967-203826021109,187109,187109,1870
CEN33:90772459-9365557400000
REGION1233:125665519-1258838021224,108224,108224,1080
REGION53:151589366-1517594981180,671180,671180,6710
REGION1243:154111571-1542820421173,649173,649173,6490
REGION1253:166300784-1665441731248,252248,252248,2520
REGION1263:184425340-1845333381113,034113,034113,0340
MUCIN_REGION_23:195629504-19582749271,225,3341,225,334165,6070
REGION1273:197397856-1975588821162,429162,429162,4290
REGION1283:198047549-1982355591184,404184,404184,4040
REGION1294:21521367-217344101220,246220,246220,2460
REGION64:34517955-348838581376,187376,187376,1870
CEN44:49708101-5174395100000
REGION1304:55678095-557857541111,943111,943111,9430
UGT2B174:68306359-690104571586,476586,476586,4760
REGION1314:120164199-1203170141158,965158,965158,9650
REGION74:155835378-1559872641164,536164,536164,5360
REGION1324:186920392-1870480611119,912119,912119,9120
REGION1334:188341423-1885423591205,944205,944205,9440
REGION1344:189361858-19004101631,178,4421,178,442378,5470
REGION1355:502435-6268961126,136126,136126,1360
SLC12A75:981494-11613611179,043179,043179,0430
SLC6A35:1318299-15097721195,710195,710195,7100
REGION95:12681426-12744010182,72882,72882,7280
REGION615:29036498-292544691226,852226,852226,8520
REGION1365:33800665-339632361164,558164,558164,5580
CEN55:46485901-5005980700000
SMA5:69216819-7161444322,757,3462,607,3461,612,9282
MCTP15:95169857-952544911101,241101,241101,2410
REGION1375:125279466-1254441511172,708172,708172,7080
REGION85:162373667-1625416481173,459173,459173,4590
REGION1385:177865465-1779961112262,849262,849131,8920
MHC6:28510120-33480577833,190,31527,789,9944,677,64398
CEN66:58553889-5982993400000
REGION1396:65774814-659440331175,808175,808175,8080
REGION1406:68262879-684022081152,148152,148152,1480
REGION106:79350008-794469111124,736124,736124,7360
REGION1416:127654803-1285211461870,480870,480870,4800
REGION1426:166220580-166285980175,00575,00575,0050
REGION996:168796076-1689516461185,823185,823185,8230
REGION1436:169724799-1699197061197,536197,536197,5360
REGION1446:170272763-1705352211271,782271,782271,7820
REGION1457:10001-1985482348,821348,821190,8690
CEN77:58169654-6082823400000
HET77:61377789-6152802000000
REGION1467:76500982-767227511209,586209,586209,5860
REGION1477:103086563-1032420971158,166158,166158,1660
REGION117:141633409-1417465831119,183119,183119,1830
TRB7:142038121-14308850311,111,5701,111,5701,111,5700
REGION1487:148214874-1484878601271,455271,455271,4550
REGION1497:157697532-1578205861126,434126,434126,4340
REGION1507:158267495-1584771741209,988209,988209,9880
REGION1518:718410-281744072,391,2122,391,212318,6870
DEFENSIN_REGION_18:7308874-76171271300,230300,230300,2300
ADAM58:39094318-398738561624,492624,492624,4920
CEN88:44033745-4587726500000
REGION1528:57173351-573033981141,812141,812141,8120
REGION1538:128554723-1289257401374,415374,415374,4150
REGION1548:141333447-1414610791133,535133,535133,5350
REGION1558:141766834-141800272136,64036,64036,6400
REGION1568:143009713-1431633981158,983158,983158,9830
REGION1578:143509961-1438287941305,841305,841305,8410
REGION1588:144628750-1447577611132,244132,244132,2440
REGION149:7428994-75771691162,988162,988162,9880
CEN99:43236168-4551855800000
REGION139:69413743-69477097171,55171,55171,5510
MAMDC29:70024113-701893181171,286171,286171,2860
REGION159:88179047-88227980160,03260,03260,0320
LPPR19:100948798-1013782911439,082439,082439,0820
REGION1610:27285655-274176081179,254179,254179,2540
CEN1010:39686683-4159352100000
REGION15910:42103240-422989391181,496181,496181,4960
REGION1810:45175233-454689711309,802309,802309,8020
REGION16010:77761309-779312261188,315188,315188,3150
REGION10411:470360-6786811210,133210,133210,1330
MUCIN_REGION_111:937258-11503112325,323325,323218,6120
KRTAP_REGION_211:1523474-17408792391,717391,717214,6250
REGION10511:2767814-30658461296,895296,895296,8950
OLFACTORY_REGION_211:7779133-79725581204,059204,059204,0590
REGION1911:25170407-253190801154,407154,407154,4070
CEN1111:51078349-5442507400000
OLFACTORY_REGION_111:56189252-568735672392,407392,407200,9980
REGION10611:69165291-69229344167,70767,70767,7070
REGION10711:134773600-1349627921186,169186,169186,1690
REGION5012:10001-1732981167,313167,313167,3130
PRH1_PRR412:10801295-1137738631,020,7101,020,710572,3490
REGION2112:27996034-281107781120,804120,804120,8040
OVOS212:31111480-313473451238,139238,139238,1390
CEN1212:34769408-3718525200000
REGION2212:57932737-580927551169,178169,178169,1780
REGION2312:58929265-590608701138,655138,655138,6550
REGION2412:101111599-1012582951152,874152,874152,8740
REGION16112:123826509-1239459541119,498119,498119,4980
REGION2012:126227198-1264054741184,319184,319184,3190
REGION16212:130323076-130394967176,06176,06176,0610
REGION16312:131543020-131584984156,13456,13456,1340
CEN1313:16000001-1805124800000
REGION16413:18698351-188841361191,684191,684191,6840
REGION16513:25652362-258286801180,306180,306180,3060
REGION16613:70341886-704428761103,832103,832103,8320
REGION16713:89598964-897640931169,134169,134169,1340
REGION16813:112182875-1125059431306,913306,913306,9130
REGION16913:113727531-113763795137,28737,28737,2870
CEN1414:16000001-1817352300000
REGION17014:91535865-918543711322,166322,166322,1660
IGH14:92885439-9439453911,511,1111,511,1111,511,1110
SERPIN_REGION_114:104449322-1046228801180,703180,703180,7030
REGION17114:105533003-10686021911,351,3931,351,3931,351,3930
CEN1515:17000001-1972525400000
PRADER_WILLI15:21242091-2322687441,265,8191,265,819327,3820
REGION2515:27865714-3294692925,457,9415,053,9345,161,4144
TRIM6915:44676664-449130531244,917244,917244,9170
MEGF1115:65908183-662848181388,773388,773388,7730
REGION17215:82289984-826417741430,880430,880430,8800
RAB11FIP316:400855-5315251134,193134,193134,1930
REGION17316:1871895-1933852163,98263,98263,9820
PAM1616:4299637-45305341232,857232,857232,8570
REGION17416:14427144-1699873912,659,7002,659,7002,659,7000
CEN1616:36311159-3828068200000
REGION2616:55772981-559685481192,462192,462192,4620
SNTB216:69140151-69224690189,67289,67289,6720
DOC2B_RPH3AL17:60001-4026372513,412513,412375,6910
ABR17:960754-14493312548,456548,456391,3570
WDR8117:1569973-17677391196,688196,688196,6880
CEN1717:22813680-2688598000000
CCL5_TBC1D317:35765469-3884175523,202,8743,202,8742,877,0740
KRTAP_REGION_117:40850733-414329354569,697569,697133,1510
MAPT17:45309498-4690377323,245,1823,195,1821,821,9921
REGION2817:70306278-705242191223,995223,995223,9950
REGION17517:71584518-718193111235,827235,827235,8270
REGION17617:72833331-729357431108,763108,763108,7630
REGION3017:77220730-77299326190,21990,21990,2190
B3GNTL117:82922720-831035771178,921178,921178,9210
CEN1818:15460900-2086120600000
REGION17718:43667277-437738921111,737111,737111,7370
REGION3118:50292194-505747921289,831289,831289,8310
REGION3218:51662936-518216421164,789164,789164,7890
REGION3318:67423723-675525511198,278148,278198,2781
REGION3418:72933122-730247811104,552104,552104,5520
REGION3518:78493467-786644692342,011342,011174,0610
REGION3618:78934886-790889972317,257317,257159,5470
REGION17818:79563122-797253661167,999167,999167,9990
ELANE19:821158-881412161,73461,73461,7340
SBNO219:1107414-1158195152,96952,96952,9690
ZNF6619:20663141-210423811385,657385,657385,6570
REGION3719:21648290-218090321170,222170,222170,2220
REGION3919:22120850-223006661188,024188,024188,0240
CEN1919:24498981-2719087400000
REGION3819:34152260-343009501155,864155,864155,8640
GPI19:34350807-34392977143,15643,15643,1560
CEACAM_REGION_119:41456581-416820001233,762233,762233,7620
LRC_KIR19:54025634-550843183513,658,68810,915,688987,10017
REGION4020:17771102-178934711128,386128,386128,3860
CEN2020:26436233-3003834800000
REGION17920:61886306-620081871118,774118,774118,7740
REGION18120:63414721-63471095158,66158,66158,6610
REGION18020:64095055-642748421183,433183,433183,4330
CEN2121:10864561-1291580800000
REGION4121:14424141-14475471163,91763,91763,9170
REGION18221:17146893-173104331166,743166,743166,7430
REGION18321:17603695-177440611143,900143,900143,9000
REGION4221:22102474-222969681201,197201,197201,1970
REGION4321:32769079-32837937174,65374,65374,6530
TMEM50B21:33405429-335125591116,689116,689116,6890
SPATC1L21:46140942-46221322182,69282,69282,6920
CEN2222:12954789-1505431800000
IGL22:22373449-226242571259,914259,914259,9140
REGION18422:23354043-235160621186,262186,262186,2620
REGION18522:23763639-240135091304,135304,135304,1350
APOL522:35685234-359426681263,666263,666263,6660
REGION18622:36779214-368777041101,331101,331101,3310
APOBEC22:38884294-39011160196,92496,92496,9240
CYP2D622:42077656-422537583412,927412,927162,8110
REGION187X:319338-6015162558,878558,878284,8690
CENXX:58605580-6241254200000
REGION188X:79965154-800970821144,206144,206144,2060
CENYY:10316945-1054403900000
Unit NameScaffold
Count
Total
Length
Ungapped
Length
Scaffold
N50
Spanned
Gaps
ALT_REF_LOCI_118754,245,47551,588,932366,58034
ALT_REF_LOCI_101248,807248,807248,8070
ALT_REF_LOCI_111170,399170,399170,3990
ALT_REF_LOCI_121157,053157,053157,0530
ALT_REF_LOCI_131171,027171,027171,0270
ALT_REF_LOCI_141204,239204,239204,2390
ALT_REF_LOCI_151209,512209,512209,5120
ALT_REF_LOCI_161155,532155,532155,5320
ALT_REF_LOCI_171170,698170,698170,6980
ALT_REF_LOCI_181184,499184,499184,4990
ALT_REF_LOCI_191170,680170,680170,6800
ALT_REF_LOCI_22617,588,86217,068,8554,795,2657
ALT_REF_LOCI_201205,194205,194205,1940
ALT_REF_LOCI_211170,665170,665170,6650
ALT_REF_LOCI_221184,516184,516184,5160
ALT_REF_LOCI_231190,932190,932190,9320
ALT_REF_LOCI_241123,111123,111123,1110
ALT_REF_LOCI_251170,701170,701170,7010
ALT_REF_LOCI_261198,005198,005198,0050
ALT_REF_LOCI_271282,224282,224282,2240
ALT_REF_LOCI_281187,935187,935187,9350
ALT_REF_LOCI_291189,352189,352189,3520
ALT_REF_LOCI_377,015,4516,002,3574,604,81113
ALT_REF_LOCI_301186,203186,203186,2030
ALT_REF_LOCI_311200,773200,773200,7730
ALT_REF_LOCI_321170,148170,148170,1480
ALT_REF_LOCI_331215,732215,732215,7320
ALT_REF_LOCI_341170,537170,537170,5370
ALT_REF_LOCI_351177,381177,381177,3810
ALT_REF_LOCI_435,932,9424,694,4204,677,64318
ALT_REF_LOCI_536,091,5544,405,0674,827,81324
ALT_REF_LOCI_635,773,2414,920,5824,606,3887
ALT_REF_LOCI_736,081,9765,321,9604,929,26918
ALT_REF_LOCI_82873,231753,231796,4793
ALT_REF_LOCI_911,066,8001,066,8001,066,8000
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