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ASM32847v1

Organism name:
Ustilago maydis 521
Infraspecific name:
Strain: 521
BioSample:
SAMN02900459
Submitter:
Broad Institute
Date:
2007/03/05
Assembly level:
Contig
Genome representation:
full
RefSeq category:
representative-genome
GenBank Assembly ID:
GCA_000328475.1 (latest)
RefSeq Assembly ID:
GCF_000328475.1 (latest)
RefSeq Assembly and GenBank Assembly Identical:
no (show details)
  • Only in GenBank: 2 unlocalized scaffolds on chromosome MT.
  • Only in RefSeq: chromosome MT.
  • Two partial mitochondrial genome contigs in the GenBank assembly were replaced by a complete mitochondrial genome sequence in the RefSeq assembly.
Data displayed for RefSeq version
WGS Project:
AACP01

IDs: 516778 [UID] 516758 [GenBank] 516778 [RefSeq]

See Genome Information for Ustilago maydis

History (Show revision history)

Global statistics

Total sequence length19,799,259
Total assembly gap length0
Number of contigs277
Contig N50127,421
Total number of chromosomes and plasmids24

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
Assembly Unit: Primary Assembly (GCF_000328485.1)
Molecule nameGenBank IDRefSeq IDUnlocalized
sequences count
Chromosome 1n/an/an/a27
Chromosome 2n/an/an/a24
Chromosome 3n/an/an/a23
Chromosome 4n/an/an/a13
Chromosome 5n/an/an/a10
Chromosome 6n/an/an/a14
Chromosome 7n/an/an/a12
Chromosome 8n/an/an/a9
Chromosome 9n/an/an/a8
Chromosome 10n/an/an/a9
Chromosome 11n/an/an/a12
Chromosome 12n/an/an/a9
Chromosome 13n/an/an/a12
Chromosome 14n/an/an/a8
Chromosome 15n/an/an/a10
Chromosome 16n/an/an/a9
Chromosome 17n/an/an/a9
Chromosome 18n/an/an/a10
Chromosome 19n/an/an/a4
Chromosome 20n/an/an/a11
Chromosome 21n/an/an/a9
Chromosome 22n/an/an/a5
Chromosome 23n/an/an/a4
unplacedn/an/an/a13

Assembly statistics

MoleculeSequence RoleTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
Chromosome 1AllAssembled moleculeUnlocalized scaffolds2,473,91002,473,910270272,473,91002,473,910121,0120121,012000000
Chromosome 2AllAssembled moleculeUnlocalized scaffolds1,877,01801,877,018240241,877,01801,877,018127,4210127,421000000
Chromosome 3AllAssembled moleculeUnlocalized scaffolds1,618,14301,618,143230231,618,14301,618,143125,2990125,299000000
Chromosome 4AllAssembled moleculeUnlocalized scaffolds887,0660887,06613013887,0660887,066203,3490203,349000000
Chromosome 5AllAssembled moleculeUnlocalized scaffolds1,374,76701,374,767100101,374,76701,374,767381,6800381,680000000
Chromosome 6AllAssembled moleculeUnlocalized scaffolds1,021,92501,021,925140141,021,92501,021,925165,9890165,989000000
Chromosome 7AllAssembled moleculeUnlocalized scaffolds956,0860956,08612012956,0860956,08697,594097,594000000
Chromosome 8AllAssembled moleculeUnlocalized scaffolds808,5890808,589909808,5890808,589158,0450158,045000000
Chromosome 9AllAssembled moleculeUnlocalized scaffolds733,2650733,265808733,2650733,265122,2590122,259000000
Chromosome 10AllAssembled moleculeUnlocalized scaffolds691,8080691,808909691,8080691,808137,2560137,256000000
Chromosome 11AllAssembled moleculeUnlocalized scaffolds693,2570693,25712012693,2570693,25784,989084,989000000
Chromosome 12AllAssembled moleculeUnlocalized scaffolds653,7310653,731909653,7310653,731146,1130146,113000000
Chromosome 13AllAssembled moleculeUnlocalized scaffolds604,9760604,97612012604,9760604,97669,001069,001000000
Chromosome 14AllAssembled moleculeUnlocalized scaffolds610,7680610,768808610,7680610,768169,8040169,804000000
Chromosome 15AllAssembled moleculeUnlocalized scaffolds597,0350597,03510010597,0350597,03584,706084,706000000
Chromosome 16AllAssembled moleculeUnlocalized scaffolds551,9690551,969909551,9690551,96992,061092,061000000
Chromosome 17AllAssembled moleculeUnlocalized scaffolds575,8270575,827909575,8270575,827133,6070133,607000000
Chromosome 18AllAssembled moleculeUnlocalized scaffolds563,4260563,42610010563,4260563,426104,0780104,078000000
Chromosome 19AllAssembled moleculeUnlocalized scaffolds562,0300562,030404562,0300562,030316,9800316,980000000
Chromosome 20AllAssembled moleculeUnlocalized scaffolds522,8840522,88411011522,8840522,884158,7590158,759000000
Chromosome 21AllAssembled moleculeUnlocalized scaffolds469,7060469,706909469,7060469,70680,973080,973000000
Chromosome 22AllAssembled moleculeUnlocalized scaffolds403,1940403,194505403,1940403,194117,5370117,537000000
Chromosome 23AllAssembled moleculeUnlocalized scaffolds344,6270344,627404344,6270344,627114,5820114,582000000
unplacedAssembled molecule87,3431387,3438,69300
MoleculeTotal
Length
Mitochondrion MT56,814
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