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CC3

Organism name:
Coprinopsis cinerea okayama7#130
Infraspecific name:
Strain: okayama7#130
BioSample:
SAMN02953595
Submitter:
Broad Institute
Date:
2010/06/16
Assembly level:
Contig
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000182895.1 (latest)
RefSeq assembly accession:
GCF_000182895.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AACS02

IDs: 231578 [UID] 231638 [GenBank] 231578 [RefSeq]

See Genome Information for Coprinopsis cinerea

History (Show revision history)

Global statistics

Total sequence length36,192,590
Total assembly gap length0
Number of contigs68
Contig N503,468,139
Contig L505
Total number of chromosomes and plasmids14

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
Assembly Unit: Primary Assembly (GCF_000182905.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome 1n/an/an/a1
Chromosome 2n/an/an/a1
Chromosome 3n/an/an/a1
Chromosome 4n/an/an/a1
Chromosome 5n/an/an/a1
Chromosome 6n/an/an/a1
Chromosome 7n/an/an/a1
Chromosome 8n/an/an/a1
Chromosome 9n/an/an/a1
Chromosome 10n/an/an/a1
Chromosome 11n/an/an/a1
Chromosome 12n/an/an/a1
Chromosome 13n/an/an/a1
unplacedn/an/an/a54

Assembly statistics

MoleculeSequence RoleTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
Chromosome 1AllAssembled moleculeUnlocalized scaffolds4,146,98604,146,9861014,146,98604,146,9864,146,98604,146,986000000
Chromosome 2AllAssembled moleculeUnlocalized scaffolds3,743,63703,743,6371013,743,63703,743,6373,743,63703,743,637000000
Chromosome 3AllAssembled moleculeUnlocalized scaffolds3,623,90203,623,9021013,623,90203,623,9023,623,90203,623,902000000
Chromosome 4AllAssembled moleculeUnlocalized scaffolds3,559,20103,559,2011013,559,20103,559,2013,559,20103,559,201000000
Chromosome 5AllAssembled moleculeUnlocalized scaffolds3,468,13903,468,1391013,468,13903,468,1393,468,13903,468,139000000
Chromosome 6AllAssembled moleculeUnlocalized scaffolds2,020,77002,020,7701012,020,77002,020,7702,020,77002,020,770000000
Chromosome 7AllAssembled moleculeUnlocalized scaffolds2,959,81402,959,8141012,959,81402,959,8142,959,81402,959,814000000
Chromosome 8AllAssembled moleculeUnlocalized scaffolds2,513,10302,513,1031012,513,10302,513,1032,513,10302,513,103000000
Chromosome 9AllAssembled moleculeUnlocalized scaffolds2,486,40102,486,4011012,486,40102,486,4012,486,40102,486,401000000
Chromosome 10AllAssembled moleculeUnlocalized scaffolds2,252,72202,252,7221012,252,72202,252,7222,252,72202,252,722000000
Chromosome 11AllAssembled moleculeUnlocalized scaffolds1,954,62301,954,6231011,954,62301,954,6231,954,62301,954,623000000
Chromosome 12AllAssembled moleculeUnlocalized scaffolds2,097,97202,097,9721012,097,97202,097,9722,097,97202,097,972000000
Chromosome 13AllAssembled moleculeUnlocalized scaffolds982,9210982,921101982,9210982,921982,9210982,921000000
unplacedAssembled molecule339,95154339,9517,87600
MoleculeSequence RoleTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
Mitochondrion MTAllAssembled moleculeUnlocalized scaffolds42,448042,44810142,448042,44842,448042,448000000