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Results: 13

1.

GRCh38

Genome Reference Consortium Human Build 38

Organism:
Homo sapiens
Submitter:
Genome Reference Consortium
Date:
2013/12/17
Assembly class:
haploid-with-alt-loci
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
reference-genome
UCSC Name:
hg38
GenBank Assembly ID:
GCA_000001405.15 (latest)
RefSeq Assembly ID:
GCF_000001405.26 (latest)
IDs:
88331 [UID] 883148 [GenBank] 884148 [RefSeq]
2.

WGSA

The December 2001 whole genome shotgun assembly (WGSA), released to the public sequence databases in 2004

Organism:
Homo sapiens
Submitter:
Celera Genomics
Date:
2004/02/25
Assembly level:
Chromosome
Genome representation:
full
GenBank Assembly ID:
GCA_000002115.2 (latest)
RefSeq Assembly ID:
n/a
IDs:
700758 [UID] 700758 [GenBank]
3.

HuRef

HuRef excluding unplaced scaffolds shorter than 3 Kbp

Organism:
Homo sapiens
Sex:
male
Submitter:
J. Craig Venter Institute
Date:
2007/09/24
Assembly level:
Chromosome
Genome representation:
full
GenBank Assembly ID:
GCA_000002125.2 (latest)
RefSeq Assembly ID:
GCF_000002125.1 (latest)
IDs:
2568 [UID] 326978 [GenBank] 2568 [RefSeq]
4.

HuRefPrime

HuRefPrime including unplaced scaffolds shorter than 3 Kbp

Organism:
Homo sapiens
Sex:
male
Submitter:
J. Craig Venter Institute
Date:
2008/09/24
Assembly level:
Chromosome
Genome representation:
full
GenBank Assembly ID:
GCA_000212995.1 (latest)
RefSeq Assembly ID:
n/a
IDs:
281188 [UID] 281188 [GenBank]
5.

CHM1_1.1

Organism:
Homo sapiens
Submitter:
Washington University School of Medicine
Date:
2013/06/14
Assembly level:
Chromosome
Genome representation:
full
GenBank Assembly ID:
GCA_000306695.2 (latest)
RefSeq Assembly ID:
GCF_000306695.2 (latest)
IDs:
706168 [UID] 706168 [GenBank] 750028 [RefSeq]
6.

CSA

The January 2001 compartmental shotgun assembly (CSA), released to the public sequence databases in 2004

Organism:
Homo sapiens
Submitter:
Celera Genomics
Date:
2004/02/25
Assembly level:
Chromosome
Genome representation:
full
GenBank Assembly ID:
GCA_000365445.1 (latest)
RefSeq Assembly ID:
n/a
IDs:
598778 [UID] 598778 [GenBank]
7.

YH_2.0

Organism:
Homo sapiens
Sex:
male
Submitter:
Beijing Genomics Institute
Date:
2013/06/10
Assembly level:
Scaffold
Genome representation:
full
GenBank Assembly ID:
GCA_000004845.2 (latest)
RefSeq Assembly ID:
n/a
IDs:
704738 [UID] 704738 [GenBank]
8.

BGIAF

Organism:
Homo sapiens
Sex:
male
Submitter:
Beijing Genomics Institute
Date:
2010/06/21
Assembly level:
Scaffold
Genome representation:
full
GenBank Assembly ID:
GCA_000005465.1 (latest)
RefSeq Assembly ID:
n/a
IDs:
165398 [UID] 165398 [GenBank]
9.

HsapALLPATHS1

Organism:
Homo sapiens
Sex:
female
Submitter:
Broad Institute
Date:
2011/01/06
Assembly level:
Scaffold
Genome representation:
full
GenBank Assembly ID:
GCA_000185165.1 (latest)
RefSeq Assembly ID:
n/a
IDs:
238948 [UID] 238948 [GenBank]
10.

CRA_TCAGchr7v2

Organism:
Homo sapiens
Submitter:
The Centre for Applied Genomics
Date:
2004/09/01
Assembly level:
Chromosome
Genome representation:
partial
GenBank Assembly ID:
GCA_000002135.3 (latest)
RefSeq Assembly ID:
GCF_000002135.2 (suppressed)
IDs:
2578 [UID] 294628 [GenBank] 2578 [RefSeq]
11.

LinearCen1.1 (normalized)

HuRef linear centromere models v1.1 (normalized)

Organism:
Homo sapiens
Sex:
male
Submitter:
University of California, Santa Cruz
Date:
2013/12/06
Assembly level:
Chromosome
Genome representation:
partial
GenBank Assembly ID:
GCA_000442335.2 (latest)
RefSeq Assembly ID:
n/a
IDs:
84681 [UID] 869928 [GenBank]
12.

RP11_1.0_unmatched_regions

Organism:
Homo sapiens
Submitter:
Roche
Date:
2013/07/31
Assembly level:
Scaffold
Genome representation:
partial
GenBank Assembly ID:
GCA_000442295.1 (latest)
RefSeq Assembly ID:
n/a
IDs:
47071 [UID] 749928 [GenBank]
13.

Watson-partial

WGS assembly of those 454 reads from the James D. Watson genome sequencing project that did not align to the Human Reference Genome.

Organism:
Homo sapiens
Submitter:
Baylor College of Medicine
Date:
2008/04/17
Assembly level:
Contig
Genome representation:
partial
GenBank Assembly ID:
GCA_000181135.1 (latest)
RefSeq Assembly ID:
n/a
IDs:
228838 [UID] 228838 [GenBank]

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