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CriGri_1.0

Description:
Genome assembly from the chinese hamster ovary cell line CHO-K1
Organism name:
Cricetulus griseus
BioSample:
SAMN02981352
Submitter:
Beijing Genomics Institute
Date:
2011/08/23
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative-genome
GenBank Assembly ID:
GCA_000223135.1 (latest)
RefSeq Assembly ID:
GCF_000223135.1 (latest)
RefSeq Assembly and GenBank Assembly Identical:
no (show details)
  • Only in RefSeq: chromosome MT.
Data displayed for RefSeq version
WGS Project:
AFTD01
Assembly method:
SOAPdenovo v. 1.05
Genome coverage:
130x
Sequencing technology:
Illumina GA IIx

IDs: 309608 [UID] 301008 [GenBank] 309608 [RefSeq]

See Genome Information for Cricetulus griseus

There are 3 assemblies for this organism

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History (Show revision history)

Comment

Source of DNA is available from ATCC Catalog No. CCL-61

Global statistics

Total sequence length2,399,786,748
Total assembly gap length81,654,506
Gaps between scaffolds0
Number of scaffolds109,152
Scaffold N501,147,233
Number of contigs265,787
Contig N5039,361
Total number of chromosomes and plasmids1

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,399,770,464109,1512,318,115,9581,147,233156,6350
MoleculeTotal
Length
Mitochondrion MT16,284
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