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ASM15815v1

Organism name:
gamma proteobacterium NOR5-3
Infraspecific name:
Strain: NOR5-3
BioSample:
SAMN02436223
Submitter:
Gordon and Betty Moore Foundation Marine Microbiology Initiative
Date:
2009/01/06
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000158155.1 (latest)
RefSeq assembly accession:
GCF_000158155.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
ACCX01

IDs: 187218 [UID] 187198 [GenBank] 187218 [RefSeq]

See Genome Information for gamma proteobacterium NOR5-3

History (Show revision history)

Comment

With funding from the Gordon and Betty Moore Foundation (www.moore.org), the J. Craig Venter Institute (www.jcvi.org) is sequencing, assembling, and auto-annotating the genomes of approximately 165 marine microbes. These microbes were contributed by collaborators worldwide, and embody an array ... of physiological diversity, including carbon fixers, photoautotrophs, photoheterotrophs, nitrifiers, and methanotrophs. This work was designed to complement other ongoing research at JCVI and elsewhere to characterize the microbial biodiversity of marine and terrestrial environments through metagenomics profiling of environmental samples.
Please be aware that the annotation is done automatically with little or no manual curation.
Genome coverage: 7.73x  more

Global statistics

Total sequence length4,208,084
Total assembly gap length4,374
Gaps between scaffolds0
Number of scaffolds6
Scaffold N50873,630
Number of contigs29
Contig N50250,657
Total number of chromosomes and plasmids0

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced4,208,08464,203,710873,630230