Display Settings:

Format

Send to:

Choose Destination

fedora0307c_IS

Organism name:
Mycobacterium tuberculosis PanR0307
Infraspecific name:
Strain: PanR0307
BioSample:
SAMN02471080
Submitter:
Texas A&M University
Date:
2013/08/08
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_000443835.1 (latest)
RefSeq assembly accession:
GCF_000443835.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
ATEP01
Assembly method:
in-house software v. 10/18/2012
Reference guided assembly:
NC_000962.2
Genome coverage:
111.0x
Sequencing technology:
Illumina GAIIx

IDs: 48241 [UID] 754078 [GenBank] 870588 [RefSeq]

See Genome Information for Mycobacterium tuberculosis

There are 1970 assemblies for this organism

See more

History (Show revision history)

Comment

Reference-guided assembly based on Mycobacterium tuberculosis H37Rv.
The first and last contigs are contiguous. A single contig was split into two, in order to make dnaA the first gene in the chromosome.
Bacteria and source DNA available from Fedora Lanzas, Instituto ... Conmemorativo Gorgas de Estudios de la Salud, ICGES, Panama  more

Global statistics

Total sequence length4,403,994
Total assembly gap length26,841
Number of contigs153
Contig N50123,057
Contig L5011
Total number of chromosomes and plasmids1

Supplemental Content

PubMed articles for this assembly

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Assembly Unit: Primary Assembly (GCF_000443845.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome CM002077.1=NZ_CM002077.1

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
Chromosome 4,403,99414,377,1534,403,9941520