Full Report

Send to:

Choose Destination

File
Clipboard
Collections

Download Assembly

Source database (GenBank or RefSeq) File type

PRJEB5957

Organism name:: Vreelandella utahensis (g-proteobacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: P-halo
BioSample:: SAMEA78793918
BioProject:: PRJEB5957
Submitter:: URMITE
Date:: 2017/02/09
Assembly type:: na
Assembly level:: Scaffold
Genome representation:: full
RefSeq category:: representative genome
GenBank assembly accession:: GCA_900162675.1 (latest)
RefSeq assembly accession:: GCF_900162675.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: FUFP01
Genome coverage:: 112x

IDs: 1002921 [UID] 4119278 [GenBank] 4141978 [RefSeq]

See Genome Information for Vreelandella utahensis

Pathogen Detection Resources

There are 3 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_900162675.1	=	GCF_900162675.1	PRJEB5957	Scaffold	Latest GenBank, Latest RefSeq

Comment

Global statistics

Total sequence length	3,525,189
Total ungapped length	3,524,135
Gaps between scaffolds	0
Number of scaffolds	13
Scaffold N50	2,675,716
Scaffold L50	1
Number of contigs	20
Contig N50	386,632
Contig L50	3
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	20

	ANI	Query coverage	Subject coverage
Declared type	100.00	100.00	100.00
Best-match type	100.00	100.00	100.00

Assembly

Genome Assembly

Result Filters

Organism group

Status

Assembly level

RefSeq category

Exclude

Annotation status

Taxonomy check status

Relation to type material

Assembly type

Sequence release date

Custom date range

Contig N50

Custom range

Scaffold N50

Custom range

Additional filters

Download Assembly

PRJEB5957

See Genome Information for Vreelandella utahensis

Pathogen Detection Resources

There are 3 assemblies for this organism

History (Show revision history)

Comment

Global statistics

Supplemental Content

Access the data

Assembly Information

Related Information

Recent activity

Global assembly definition

Assembly statistics

Assembly QA

Taxonomy Check Data

Declared organism

Best-matching type-strain assembly for declared species

Best-matching type-strain assembly

Average Nucleotide Identity (ANI) data

ANI result