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7748_6#66

Organism name:
Staphylococcus aureus (firmicutes)
Taxonomy check:
OK
Infraspecific name:
Strain: BSAC2756
BioSample:
SAMEA1464598
BioProject:
PRJEB2756
Submitter:
SC
Date:
2016/02/18
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_900056685.1 (latest)
RefSeq assembly accession:
GCF_900056685.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
FHEC01
Genome coverage:
100x

IDs: 652611 [UID] 2913498 [GenBank] 2928568 [RefSeq]

See Genome Information for Staphylococcus aureus

Pathogen Detection Resources

There are 90921 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length2,835,428
Total ungapped length2,835,411
Gaps between scaffolds0
Number of scaffolds54
Scaffold N50150,860
Scaffold L506
Number of contigs55
Contig N50150,860
Contig L506
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)54

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced2,835,428542,835,411150,86010

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Staphylococcus aureusStaphylococcus aureus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_001027105.1Staphylococcus aureustype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_001027105.1Staphylococcus aureustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type98.1790.9792.70
Best-match type98.1790.9792.70

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna