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14555_5#54

Organism name:
Neisseria meningitidis (b-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: 2842STDY5881395
BioSample:
SAMEA2674248
BioProject:
PRJEB4909
Submitter:
SC
Date:
2016/02/10
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_900034245.1 (latest)
RefSeq assembly accession:
GCF_900034245.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
FFAK01
Genome coverage:
100x

IDs: 651171 [UID] 2909798 [GenBank] 2923308 [RefSeq]

See Genome Information for Neisseria meningitidis

Pathogen Detection Resources

There are 8126 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length2,201,442
Total ungapped length2,191,594
Gaps between scaffolds0
Number of scaffolds83
Scaffold N5072,737
Scaffold L5010
Number of contigs124
Contig N5035,524
Contig L5022
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)83

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced2,201,442832,191,59472,737410

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Neisseria meningitidisNeisseria meningitidis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_022869645.1Neisseria meningitidistype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_022869645.1Neisseria meningitidistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type97.3489.3789.80
Best-match type97.3489.3789.80

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna