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ASM200644v1

Organism name:
Clostridium beijerinckii (firmicutes)
Taxonomy check:
OK
Infraspecific name:
Strain: DSM 791
BioSample:
SAMN05170524
BioProject:
PRJNA322803
Submitter:
Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory
Date:
2017/02/23
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_002006445.1 (latest)
RefSeq assembly accession:
GCF_002006445.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
LZZC01
Assembly method:
SPAdes v. 3.5.0
Expected final version:
yes
Genome coverage:
131x
Sequencing technology:
Illumina

IDs: 1012801 [UID] 4159518 [GenBank] 4160768 [RefSeq]

See Genome Information for Clostridium beijerinckii

There are 251 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length5,781,472
Total ungapped length5,781,472
Number of contigs264
Contig N5043,059
Contig L5041
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)264

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced5,781,4722645,781,47243,05900

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Clostridium beijerinckiiClostridium beijerinckii

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_018223745.1Clostridium beijerinckiisuspected-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_018223745.1Clostridium beijerinckiisuspected-type

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9999.8497.01
Best-match type99.9999.8497.01

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna