Full Report

Send to:

Choose Destination

File
Clipboard
Collections

Download Assembly

Source database (GenBank or RefSeq) File type

ASM159859v1

Organism name:: Achromobacter xylosoxidans NBRC 15126 = ATCC 27061 (b-proteobacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: NBRC 15126
BioSample:: SAMD00046892
BioProject:: PRJDB238
Submitter:: National Institute of Technology and Evaluation
Date:: 2016/03/11
Assembly type:: na
Assembly level:: Contig
Genome representation:: full
Relation to type material:: assembly from type material
GenBank assembly accession:: GCA_001598595.1 (latest)
RefSeq assembly accession:: GCF_001598595.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: BCZG01
Assembly method:: newbler v. 3.0
Genome coverage:: 96x
Sequencing technology:: 454 GS-FLX Titanium; Illumina HiSeq 1000

IDs: 709731 [UID] 3141458 [GenBank] 3148698 [RefSeq]

See Genome Information for Achromobacter xylosoxidans

Pathogen Detection Resources

There are 190 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_001598595.1	=	GCF_001598595.1	ASM159859v1	Contig	Latest GenBank, Latest RefSeq

Comment



Strain NBRC 15126 available from NBRC culture collection (http://www.nite.go.jp/en/nbrc/index.html).

The NBRC Whole Genome Shotgun Project aims to provide "reference genomes" of NBRC culture collection strains for identifying useful genes for taxonomic classification, risk/safety assessment, and industrial application, and for understanding ... the structure and evolution of microbial genomes.
(http://www.nite.go.jp/en/nbrc/genome/project/wgs/ project_wgs2.html)  more

Global statistics

Total sequence length	6,792,737
Total ungapped length	6,792,737
Number of contigs	63
Contig N50	201,844
Contig L50	11
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	63

	ANI	Query coverage	Subject coverage
Declared type	99.99	99.97	99.67
Best-match type	99.99	99.97	99.67

Assembly

Genome Assembly

Result Filters

Organism group

Status

Assembly level

RefSeq category

Exclude

Annotation status

Taxonomy check status

Relation to type material

Assembly type

Sequence release date

Custom date range

Contig N50

Custom range

Scaffold N50

Custom range

Additional filters

Download Assembly

ASM159859v1

See Genome Information for Achromobacter xylosoxidans

Pathogen Detection Resources

There are 190 assemblies for this organism

History (Show revision history)

Comment

Global statistics

Supplemental Content

Access the data

Assembly Information

Related Information

Recent activity

Global assembly definition

Assembly statistics

Assembly QA

Taxonomy Check Data

Declared organism

Best-matching type-strain assembly for declared species

Best-matching type-strain assembly

Average Nucleotide Identity (ANI) data

ANI result