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IDs: 634921 [UID] 2858058 [GenBank] 2861338 [RefSeq]
Bacteria and source DNA were provide by Amanda Lewis, Ph.D. (lewis@borcim.wustl.edu), Washington University School of Medicine, Department of Molecular Microbiology and Obstetrics and Gynecology - Center for Women's Infectious Disease Research, Campus Box 8230 660 S. Euclid Ave. St. ... Louis, MO 63110. Collection of this isolate was part of the ###Polymicrobial Synergy Study,### which was funded in part by the National Institutes of Health grant P50 DK064540-11. Coding sequences were predicted using GeneMark and Glimmer3. Intergenic regions not spanned by GeneMark and Glimmer3 were blasted against NCBI's non-redundant (NR) database and predictions generated based on protein alignments. tRNA genes were determined using tRNAscan-SE and non-coding RNA genes by RNAmmer and Rfam. The final gene set is processed through several programs such as Kegg, psortB and Interproscan to determine possible function. Gene product names are determined by BER. Gene names are generated at the contig level and may not necessarily reflect any known order or orientation between contigs. This is a reference genomes for the Human Microbiome Project and the work was funded by the National Institutes of Health (NIH) grant U54 HG004968. more
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