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Source database (GenBank or RefSeq) File type

ASM107086v1

Organism name:: Stenotrophomonas maltophilia (g-proteobacteria)
Taxonomy check:: Inconclusive
Infraspecific name:: Strain: 32_SMAL
BioSample:: SAMN03197510
BioProject:: PRJNA267549
Submitter:: University of Washington
Date:: 2015/07/10
Assembly type:: na
Assembly level:: Scaffold
Genome representation:: full
GenBank assembly accession:: GCA_001070865.1 (latest)
RefSeq assembly accession:: GCF_001070865.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: JVLS01
Assembly method:: ABYSS v. 1.3.5
Genome coverage:: 28x
Sequencing technology:: Illumina HiSeq

IDs: 372541 [UID] 1883268 [GenBank] 2021718 [RefSeq]

See Genome Information for Stenotrophomonas maltophilia

Pathogen Detection Resources

There are 1910 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_001070865.1	=	GCF_001070865.1	ASM107086v1	Scaffold	Latest GenBank, Latest RefSeq

Comment

Source DNA available from Steve Salipante, University of Washington Department of Laboratory Medicine, Box 357110, 1959 NE Pacific Street, NW120 Seattle, WA 98195-7110

Global statistics

Total sequence length	5,198,613
Total ungapped length	5,197,568
Gaps between scaffolds	0
Number of scaffolds	104
Scaffold N50	88,601
Scaffold L50	19
Number of contigs	117
Contig N50	72,990
Contig L50	22
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	104

	ANI	Query coverage	Subject coverage
Declared type	92.61	76.61	80.34
Best-match type	94.42	80.05	83.15

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ASM107086v1

See Genome Information for Stenotrophomonas maltophilia

Pathogen Detection Resources

There are 1910 assemblies for this organism

History (Show revision history)

Comment

Global statistics

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Assembly Information

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Global assembly definition

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Best-matching type-strain assembly for declared species

Best-matching type-strain assembly

Average Nucleotide Identity (ANI) data

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