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ASM105494v1

  • Anomalous assembly.
Organism name:
Corynebacterium falsenii (high G+C Gram-positive bacteria)
Taxonomy check:
Inconclusive
Infraspecific name:
Strain: 355_CFAL
BioSample:
SAMN03197545
BioProject:
PRJNA267549
Submitter:
University of Washington
Date:
2015/07/10
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Assembly anomaly:
unverified source organism
Excluded from RefSeq:
  • unverified source organism
GenBank assembly accession:
GCA_001054945.1 (latest)
RefSeq assembly accession:
GCF_001054945.1 (suppressed)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JVKJ01
Assembly method:
ABYSS v. 1.3.5
Genome coverage:
15x
Sequencing technology:
Illumina HiSeq

IDs: 364571 [UID] 1867328 [GenBank] 1891758 [RefSeq]

See Genome Information for Corynebacterium falsenii

There are 8 assemblies for this organism

See more

History (Show revision history)

Comment

Source DNA available from Steve Salipante, University of Washington Department of Laboratory Medicine, Box 357110, 1959 NE Pacific Street, NW120 Seattle, WA 98195-7110

Global statistics

Total sequence length2,183,634
Total ungapped length2,183,634
Number of contigs5
Contig N501,152,335
Contig L501
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)5

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,183,63452,183,6341,152,33500

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Corynebacterium falseniiCorynebacterium falsenii

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_020099275.1Corynebacterium falseniitype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_020099275.1Corynebacterium falseniitype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type85.124.994.07
Best-match type85.124.994.07

ANI result

Taxonomy check statusBest match statusComment
Inconclusivelow-coveragena