U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



91SGR

Organism name:
Klebsiella pneumoniae (enterobacteria)
Taxonomy check:
OK
BioSample:
SAMEA2602985
BioProject:
PRJEB6543
Submitter:
UNIMI
Date:
2014/11/04
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Excluded from RefSeq:
  • missing strain identifier
GenBank assembly accession:
GCA_000822945.1 (latest)
RefSeq assembly accession:
GCF_000822945.1 (suppressed)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CCJB01
Genome coverage:
127x

IDs: 245221 [UID] 1482798 [GenBank] 1500278 [RefSeq]

See Genome Information for Klebsiella pneumoniae

Pathogen Detection Resources

There are 65265 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length5,413,416
Total ungapped length5,413,416
Number of contigs86
Contig N50142,915
Contig L5013
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)86

Supplemental Content

Access the data

Assembly Information

Related Information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Contig
Count		Ungapped
Length		Contig
N50		Spanned
Gaps		Unspanned
Gaps
unplaced5,413,416865,413,416142,91500

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Klebsiella pneumoniaeKlebsiella pneumoniae

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000788015.1Klebsiella pneumoniae subsp. pneumoniaetype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000788015.1Klebsiella pneumoniaetype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.2391.7086.69
Best-match type99.2391.7086.69

ANI result

Taxonomy check statusBest match statusComment
OKderived-species-matchna