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Source database (GenBank or RefSeq) File type

AZPAE15036

Organism name:: Pseudomonas aeruginosa (g-proteobacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: AZPAE15036
BioSample:: SAMN03105733
BioProject:: PRJNA264310
Submitter:: AstraZeneca
Date:: 2014/12/04
Assembly type:: na
Assembly level:: Scaffold
Genome representation:: full
GenBank assembly accession:: GCA_000789645.1 (latest)
RefSeq assembly accession:: GCF_000789645.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: JTNK01
Assembly method:: CLC Bio v. 6.0
Genome coverage:: 10x
Sequencing technology:: Illumina MiSeq

IDs: 228461 [UID] 1401758 [GenBank] 1416168 [RefSeq]

See Genome Information for Pseudomonas aeruginosa

Pathogen Detection Resources

There are 30409 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000789645.1	=	GCF_000789645.1	AZPAE15036	Scaffold	Latest GenBank, Latest RefSeq

Comment

Source DNA available from Veronica Kos, AstraZenea, 35 Gatehouse Drive, Waltham MA USA, 02451

Global statistics

Total sequence length	6,412,424
Total ungapped length	6,409,404
Gaps between scaffolds	0
Number of scaffolds	77
Scaffold N50	226,550
Scaffold L50	10
Number of contigs	110
Contig N50	191,629
Contig L50	13
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	77

	ANI	Query coverage	Subject coverage
Declared type	99.40	94.33	96.10
Best-match type	99.40	94.33	96.10

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AZPAE15036

See Genome Information for Pseudomonas aeruginosa

Pathogen Detection Resources

There are 30409 assemblies for this organism

History (Show revision history)

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Best-matching type-strain assembly for declared species

Best-matching type-strain assembly

Average Nucleotide Identity (ANI) data

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