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ASM71588v1

Organism name:
Glycomyces tenuis (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: NRRL B-16895
BioSample:
SAMN02645320
BioProject:
PRJNA238534
Submitter:
University of Illinois
Date:
2014/07/01
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_000715885.1 (latest)
RefSeq assembly accession:
GCF_000715885.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JNYS01
Assembly method:
IDBA UD v. 1.0.9
Genome coverage:
62x
Sequencing technology:
Illumina

IDs: 191181 [UID] 1155118 [GenBank] 1438158 [RefSeq]

See Genome Information for Glycomyces tenuis

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

Bacteria available from NRRL

Global statistics

Total sequence length6,032,688
Total ungapped length5,699,057
Gaps between scaffolds0
Number of scaffolds85
Scaffold N50206,644
Scaffold L5010
Number of contigs1,572
Contig N506,161
Contig L50273
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)1,572

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced6,032,688855,699,057206,6441,4870

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Glycomyces tenuisGlycomyces tenuis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000427885.1Glycomyces tenuis DSM 44171type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000427885.1Glycomyces tenuistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9899.5298.92
Best-match type99.9899.5298.92

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna