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Source database (GenBank or RefSeq) File type

ASM53493v2

Organism name:: Bacillus anthracis (firmicutes)
Taxonomy check:: OK
Infraspecific name:: Strain: CZC5
BioSample:: SAMD00002586
BioProject:: PRJDB1571
Submitter:: Research Center for Zoonosis Control
Date:: 2018/08/23
Assembly type:: na
Assembly level:: Complete Genome
Genome representation:: full
GenBank assembly accession:: GCA_000534935.2 (latest)
RefSeq assembly accession:: GCF_000534935.2 (latest)
RefSeq assembly and GenBank assembly identical:: yes
Assembly method:: Pilon v. 1.22
Genome coverage:: 25x
Sequencing technology:: PacBio RS, Illumina MiSeq

IDs: 1981791 [UID] 7457908 [GenBank] 7466698 [RefSeq]

See Genome Information for Bacillus anthracis

Pathogen Detection Resources

There are 872 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000534935.2	=	GCF_000534935.2	ASM53493v2	Complete Genome	Latest GenBank, Latest RefSeq
GCA_000534935.1	=	GCF_000534935.1	ASM53493v1	Contig	Replaced GenBank, Replaced RefSeq

Comment

Genome-Annotation-Data

##Genome-Annotation-Data-START##Annotation Provider::NCBI RefSeq
Annotation Date::04/26/2023 05:22:57
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.5
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::5,759
CDSs (total)::5,628
Genes (coding)::5,260
CDSs (with protein)::5,260
Genes (RNA)::131
rRNAs::10, 10, 10 (5S, 16S, 23S)
complete rRNAs::10, 10, 10 (5S, 16S, 23S)
tRNAs::96
ncRNAs::5
Pseudo Genes (total)::368
CDSs (without protein)::368
Pseudo Genes (ambiguous residues)::0 of 368
Pseudo Genes (frameshifted)::245 of 368
Pseudo Genes (incomplete)::86 of 368
Pseudo Genes (internal stop)::97 of 368
Pseudo Genes (multiple problems)::51 of 368
##Genome-Annotation-Data-END##

Global statistics

Total sequence length	5,495,687
Total ungapped length	5,495,687
Total number of chromosomes and plasmids	3

Molecule name	GenBank sequence		RefSeq sequence
Chromosome	AP018443.1	=	NZ_AP018443.1
Plasmid pXO1	AP018444.1	=	NZ_AP018444.1
Plasmid pXO2	AP018445.1	=	NZ_AP018445.1

Molecule	Total Length
All	5,495,687
Chromosome	5,219,278
Plasmid pXO1	181,607
Plasmid pXO2	94,802

	ANI	Query coverage	Subject coverage
Declared type	99.97	99.99	99.79
Best-match type	99.97	99.99	99.79

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ASM53493v2

See Genome Information for Bacillus anthracis

Pathogen Detection Resources

There are 872 assemblies for this organism

History (Show revision history)

Comment

Genome-Annotation-Data

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