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Source database (GenBank or RefSeq) File type

ASM41942v1

Organism name:: Acinetobacter baumannii BJAB0868 (g-proteobacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: BJAB0868
BioSample:: SAMN02604246
BioProject:: PRJNA74425
Submitter:: University of Texas at Dallas
Date:: 2013/07/09
Assembly type:: na
Assembly level:: Complete Genome
Genome representation:: full
GenBank assembly accession:: GCA_000419425.1 (latest)
RefSeq assembly accession:: GCF_000419425.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
Assembly method:: VELVET v. 1.0.18
Sequencing technology:: Illumina

IDs: 39461 [UID] 727448 [GenBank] 734508 [RefSeq]

See Genome Information for Acinetobacter baumannii

Pathogen Detection Resources

There are 26623 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000419425.1	=	GCF_000419425.1	ASM41942v1	Complete Genome	Latest GenBank, Latest RefSeq

Comment

Genome-Annotation-Data

##Genome-Annotation-Data-START##Annotation Provider::NCBI RefSeq
Annotation Date::03/12/2023 13:48:14
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.4
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::3,849
CDSs (total)::3,752
Genes (coding)::3,654
CDSs (with protein)::3,654
Genes (RNA)::97
rRNAs::6, 6, 6 (5S, 16S, 23S)
complete rRNAs::6, 6, 6 (5S, 16S, 23S)
tRNAs::75
ncRNAs::4
Pseudo Genes (total)::98
CDSs (without protein)::98
Pseudo Genes (ambiguous residues)::0 of 98
Pseudo Genes (frameshifted)::53 of 98
Pseudo Genes (incomplete)::34 of 98
Pseudo Genes (internal stop)::18 of 98
Pseudo Genes (multiple problems)::7 of 98
##Genome-Annotation-Data-END##

Global statistics

Total sequence length	4,005,822
Total ungapped length	4,005,822
Total number of chromosomes and plasmids	4

Molecule name	GenBank sequence		RefSeq sequence
Chromosome	CP003849.1	=	NC_021729.1
Plasmid p1BJAB0868	CP003850.1	=	NC_021730.1
Plasmid p2BJAB0868	CP003888.1	=	NC_021731.1
Plasmid p3BJAB0868	CP003908.1	=	NC_021732.1

Molecule	Total Length
All	4,005,822
Chromosome	3,906,795
Plasmid p1BJAB0868	8,721
Plasmid p2BJAB0868	70,167
Plasmid p3BJAB0868	20,139

	ANI	Query coverage	Subject coverage
Declared type	99.75	90.03	90.60
Best-match type	99.75	90.03	90.60

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ASM41942v1

See Genome Information for Acinetobacter baumannii

Pathogen Detection Resources

There are 26623 assemblies for this organism

History (Show revision history)

Comment

Genome-Annotation-Data

Global statistics

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