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Ente_faec_UAA1014_V1

Organism name:
Enterococcus faecalis EnGen0233 (firmicutes)
Taxonomy check:
OK
Infraspecific name:
Strain: UAA1014
BioSample:
SAMN00809144
BioProject:
PRJNA88811
Submitter:
Broad Institute
Date:
2013/05/15
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000396985.1 (latest)
RefSeq assembly accession:
GCF_000396985.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AIZW01
Assembly method:
allpaths v. R41985
Genome coverage:
284.0x
Sequencing technology:
Illumina

IDs: 684008 [UID] 684008 [GenBank] 1090748 [RefSeq]

See Genome Information for Enterococcus faecalis

There are 8807 assemblies for this organism

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History (Show revision history)

Comment

Please be aware that the annotation is done automatically with little or no manual curation.

Global statistics

Total sequence length2,951,954
Total ungapped length2,943,835
Gaps between scaffolds0
Number of scaffolds24
Scaffold N502,821,387
Scaffold L501
Number of contigs34
Contig N501,567,401
Contig L501
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)34

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,951,954242,943,8352,821,387100

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Enterococcus faecalis EnGen0233Enterococcus faecalis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_022869705.1Enterococcus faecalistype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_022869705.1Enterococcus faecalistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.6288.4190.78
Best-match type99.6288.4190.78

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna