Full Report

Send to:

Choose Destination

File
Clipboard
Collections

Download Assembly

Source database (GenBank or RefSeq) File type

ASM33525v2

Organism name:: Escherichia coli 99.0839 (E. coli)
Taxonomy check:: OK
Infraspecific name:: Strain: 99.0839
BioSample:: SAMN01112697
BioProject:: PRJNA65677
Submitter:: Institute for Genome Sciences
Date:: 2013/01/31
Assembly type:: na
Release type:: minor
Assembly level:: Contig
Genome representation:: full
GenBank assembly accession:: GCA_000335255.2 (latest)
RefSeq assembly accession:: GCF_000335255.2 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: AOEB01
Assembly method:: Celera Assembler v. 7.0
Genome coverage:: 69.68x
Sequencing technology:: Illumina

IDs: 549581 [UID] 2490448 [GenBank] 2490468 [RefSeq]

See Genome Information for Escherichia coli

Pathogen Detection Resources

There are 265830 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000335255.2	=	GCF_000335255.2	ASM33525v2	Contig	Latest GenBank, Latest RefSeq
GCA_000335255.1	=	GCF_000335255.1	ASM33525v1	Contig	Replaced GenBank, Replaced RefSeq

Comment

Bacteria available from the Biodefense and Emerging Infections Research Resources Repository

Global statistics

Total sequence length	5,183,560
Total ungapped length	5,183,560
Number of contigs	181
Contig N50	74,377
Contig L50	21
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	181

	ANI	Query coverage	Subject coverage
Declared type	99.92	97.54	95.40
Best-match type	99.92	97.54	95.40

Assembly

Genome Assembly

Result Filters

Organism group

Status

Assembly level

RefSeq category

Exclude

Annotation status

Taxonomy check status

Relation to type material

Assembly type

Sequence release date

Custom date range

Contig N50

Custom range

Scaffold N50

Custom range

Additional filters

Download Assembly

ASM33525v2

See Genome Information for Escherichia coli

Pathogen Detection Resources

There are 265830 assemblies for this organism

History (Show revision history)

Comment

Global statistics

Supplemental Content

Access the data

Assembly Information

Related Information

Recent activity

Global assembly definition

Assembly statistics

Assembly QA

Taxonomy Check Data

Declared organism

Best-matching type-strain assembly for declared species

Best-matching type-strain assembly

Average Nucleotide Identity (ANI) data

ANI result