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ASM32557v1

Organism name:
Pteropus alecto (black flying fox)
Sex:
male
BioSample:
SAMN01103203
Submitter:
BGI
Date:
2013/12/04
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000325575.1 (latest)
RefSeq assembly accession:
GCF_000325575.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT.
  • Data displayed for RefSeq version
WGS Project:
ALWS01
Assembly method:
SOAPdenovo v. 1.06
Genome coverage:
110x
Sequencing technology:
Illumina HighSeq 2000

IDs: 515548 [UID] 515548 [GenBank] 942378 [RefSeq]

See Genome Information for Pteropus alecto

History (Show revision history)

Global statistics

Total sequence length1,985,975,446
Total assembly gap length41,333,505
Gaps between scaffolds0
Number of scaffolds65,598
Scaffold N5015,954,802
Scaffold L5036
Number of contigs170,164
Contig N5031,841
Contig L5018,318
Total number of chromosomes and plasmids1

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,985,958,70765,5971,944,625,20215,954,802104,5660
MoleculeTotal
Length
Mitochondrion MT16,739