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Source database (GenBank or RefSeq) File type

ASM16741v1

Organism name:: Campylobacter coli RM2228 (e-proteobacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: RM2228
BioSample:: SAMN02435832
BioProject:: PRJNA12516
Submitter:: TIGR
Date:: 2005/01/04
Assembly type:: na
Assembly level:: Scaffold
Genome representation:: full
GenBank assembly accession:: GCA_000167415.1 (latest)
RefSeq assembly accession:: GCF_000167415.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: AAFL01

IDs: 203498 [UID] 203478 [GenBank] 203498 [RefSeq]

See Genome Information for Campylobacter coli

Pathogen Detection Resources

There are 32177 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000167415.1	=	GCF_000167415.1	ASM16741v1	Scaffold	Latest GenBank, Latest RefSeq

Comment

Global statistics

Total sequence length	1,860,666
Total ungapped length	1,860,666
Gaps between scaffolds	0
Number of scaffolds	38
Scaffold N50	105,374
Scaffold L50	4
Number of contigs	38
Contig N50	105,374
Contig L50	4
Total number of chromosomes and plasmids	1
Number of component sequences (WGS or clone)	38

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Plasmid pCC178	n/a	n/a	n/a	20
unplaced	n/a	n/a	n/a	18

Molecule	Sequence Role	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps	Unspanned Gaps
All	Assembled molecule	1,860,666	38	1,860,666	105,374	0	0
Plasmid pCC178	AllAssembled moleculeUnlocalized scaffolds	177,8530177,853	20020	177,8530177,853	18,092018,092	000	000
unplaced	Assembled molecule	1,682,813	18	1,682,813	179,516	0	0

	ANI	Query coverage	Subject coverage
Declared type	98.42	87.63	84.11
Best-match type	98.42	87.63	84.11

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ASM16741v1

See Genome Information for Campylobacter coli

Pathogen Detection Resources

There are 32177 assemblies for this organism

History (Show revision history)

Comment

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