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Source database (GenBank or RefSeq) File type

ASM15759v1

Organism name:: Enterococcus faecium 1,231,410 (firmicutes)
Taxonomy check:: OK
Infraspecific name:: Strain: 1,231,410
BioSample:: SAMN02595271
BioProject:: PRJNA32961
Submitter:: Broad Institute
Date:: 2009/06/22
Assembly type:: na
Assembly level:: Scaffold
Genome representation:: full
GenBank assembly accession:: GCA_000157595.1 (latest)
RefSeq assembly accession:: GCF_000157595.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: ACBA01

IDs: 186118 [UID] 186098 [GenBank] 186118 [RefSeq]

See Genome Information for Enterococcus faecium

Pathogen Detection Resources

There are 23391 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000157595.1	=	GCF_000157595.1	ASM15759v1	Scaffold	Latest GenBank, Latest RefSeq

Comment

Genome Coverage: 18.30x
Annotation was added to the scaffolds in September 2009

Global statistics

Total sequence length	3,101,595
Total ungapped length	2,943,813
Gaps between scaffolds	0
Number of scaffolds	69
Scaffold N50	283,980
Scaffold L50	4
Number of contigs	230
Contig N50	30,665
Contig L50	31
Total number of chromosomes and plasmids	1
Number of component sequences (WGS or clone)	230

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Plasmid unnamed	n/a	n/a	n/a	4
unplaced	n/a	n/a	n/a	65

Molecule	Sequence Role	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps	Unspanned Gaps
All	Assembled molecule	3,101,595	69	2,943,813	283,980	161	0
Plasmid unnamed	AllAssembled moleculeUnlocalized scaffolds	90,173090,173	404	88,001088,001	60,477060,477	404	000
unplaced	Assembled molecule	3,011,422	65	2,855,812	283,980	157	0

	ANI	Query coverage	Subject coverage
Declared type	99.52	82.05	92.47
Best-match type	99.52	82.05	92.47

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ASM15759v1

See Genome Information for Enterococcus faecium

Pathogen Detection Resources

There are 23391 assemblies for this organism

History (Show revision history)

Comment

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