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43222_A01

  • Anomalous assembly.
Organism name:
Streptococcus dysgalactiae subsp. equisimilis (firmicutes)
Taxonomy check:
Failed
Infraspecific name:
Strain: NCTC11565
BioSample:
SAMEA3696442
BioProject:
PRJEB6403
Submitter:
SC
Date:
2019/06/02
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Assembly anomaly:
unverified source organism
Excluded from RefSeq:
  • unverified source organism
  • genome length too large
GenBank assembly accession:
GCA_901542305.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
CABEHZ01
Genome coverage:
100x

IDs: 3505831 [UID] 11336068 [GenBank]

See Genome Information for Streptococcus dysgalactiae

There are 207 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length6,566,550
Total ungapped length6,566,550
Number of contigs15
Contig N50592,200
Contig L503
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)15

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced6,566,550156,566,550592,20000

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptococcus dysgalactiae subsp. equisimilisStreptococcus dysgalactiae

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_900459225.1Streptococcus dysgalactiae subsp. dysgalactiaetype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_002601815.1Pseudomonas paraeruginosatype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type77.350.060.18
Best-match type99.4690.1893.27

ANI result

Taxonomy check statusBest match statusComment
Failedmismatchna